CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g61010

Gene name ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.33 38.1 At5g61010 836222 ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. S.X. H.G.
0.60 75.7 At4g13510 826983 AMT1 Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake. S.X. H.G.
0.55 70.6 At1g66880 843006 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA S.X. H.G.
0.50 65.3 At1g34750 840379 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:plasma membrane;PMOBFVA S.X. H.G.
0.33 38.1 At5g48380 834892 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
35.5 99.7 GSM128683 Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
35.5 99.7 GSM131603 ATGE_41_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
33.6 99.7 GSM128662 Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
31.3 99.7 GSM131604 ATGE_41_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
31.0 99.7 GSM128686 Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
28.1 99.7 GSM131605 ATGE_41_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
27.3 99.7 GSM131395 AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1 GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
25.3 99.6 GSM128672 Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
24.3 99.6 GSM131281 AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
22.7 99.6 GSM128685 Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 6e-2 40 At3g19990 821537 unknown protein F:unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;PBO C.G. S.X.
0.01 2e-1 38 At1g19835 838571 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV C.G. S.X.
0.01 2e-1 38 At1g01420 837503 UGT72B3 (UDP-GLUCOSYL TRANSFERASE 72B3) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF C.G. S.X.
0.01 1e+0 36 At5g03540 831809 ATEXO70A1 (exocyst subunit EXO70 family protein A1) AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree C.G. S.X.
0.01 1e+0 36 At4g32830 829419 AtAUR1 (ATAURORA1) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. It specifically phosphorylates Ser10 of histone H3 and colocalizes with phosphorylated histone H3 during mitosis. C.G. S.X.
0.01 1e+0 36 At3g23020 821876 pentatricopeptide (PPR) repeat-containing protein F:binding;P:biological_process unknown;C:chloroplast;POMFBA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-1 38 Glycine max GmaAffx.89382.1.S1_s_at CK606582 Putative DIM-like protein (DIM) - 6e-95 At5g08290 YLS8 C.G. S.X.
0.01 2e+0 34 Hordeum vulgare Contig13060_at Contig13060 - - 5e-10 At4g10060 catalytic/ glucosylceramidase C.G. S.X.
0.02 8e+0 34 Oryza sativa Os05g0302500 9633.m02105 - - 5e+0 At4g30280 XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18) C.G. S.X.
0.04 6e-9 63 Populus trichocarpa PtpAffx.223112.1.S1_at pmrna40941 hypothetical protein - 4e-9 At5g61010 ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) C.G. S.X.
0.02 4e+0 34 Triticum aestivum TaAffx.101420.2.S1_at CA596873 - - 3e-16 At2g26910 PDR4 (PLEIOTROPIC DRUG RESISTANCE 4) C.G. S.X.
0.01 3e-1 36 Vitis vinifera 1622754_at CF518735 hypothetical protein LOC100257277 - 2e-1 At5g05360 unknown protein C.G. S.X.
0.02 7e+0 32 Zea mays ZmAffx.1024.1.A1_at AI881614 - - 3e+0 At5g42325 transcription elongation factor-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006904 The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis.
L GO:0006887 A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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