CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g59720

Gene name HSP18.2 (heat shock protein 18.2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.75 86.9 At5g59720 836093 HSP18.2 (heat shock protein 18.2) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock. S.X. H.G.
0.96 97.3 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM S.X. H.G.
0.94 96.7 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM S.X. H.G.
0.92 96.0 At5g12020 831075 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM S.X. H.G.
0.92 96.0 At1g74310 843771 ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. S.X. H.G.
0.91 95.6 At2g20560 816578 DNAJ heat shock family protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV S.X. H.G.
0.91 95.6 At5g12030 831076 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. S.X. H.G.
0.90 95.1 At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds S.X. H.G.
0.89 94.6 At2g46240 819232 BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. S.X. H.G.
0.89 94.6 At4g12400 826849 stress-inducible protein, putative F:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
305.1 100.0 GSM131458 AtGen_6-9822_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
267.3 100.0 GSM131457 AtGen_6-9821_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
260.0 100.0 GSM131462 AtGen_6-9422_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
258.3 100.0 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
257.1 100.0 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
234.4 100.0 GSM131453 AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
215.8 100.0 E-MEXP-1725-raw-cel-1669614562
214.5 100.0 GSM131461 AtGen_6-9421_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
213.3 100.0 GSM131454 AtGen_6-9322_Heatstress-Roots-3.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
211.5 100.0 E-MEXP-1725-raw-cel-1669614623
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.54 6e-36 151 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM C.G. S.X.
0.63 1e-33 143 At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds C.G. S.X.
0.47 2e-17 89 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM C.G. S.X.
0.21 2e-7 56 At1g59860 842280 17.6 kDa class I heat shock protein (HSP17.6A-CI) F:unknown;P:response to heat;C:unknown;BPOFMA C.G. S.X.
0.06 6e-2 38 At5g37670 833746 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) F:molecular_function unknown;P:response to heat;C:unknown;BPOFAM C.G. S.X.
0.02 2e-1 36 At3g63490 825524 ribosomal protein L1 family protein F:structural constituent of ribosome, RNA binding;P:translation, RNA processing;C:in 6 components;OBAFMP C.G. S.X.
0.02 9e-1 34 At5g14850 831337 mannosyltransferase, putative F:mannosyltransferase activity, transferase activity, transferring glycosyl groups;P:GPI anchor biosynthetic process, GPI anchor metabolic process;C:endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane;MFOPB C.G. S.X.
0.02 9e-1 34 At5g59500 836069 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOAFPM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 9e-11 67 Glycine max GmaAffx.92420.1.S1_s_at CF808145 - - 3e-7 At2g29500 17.6 kDa class I small heat shock protein (HSP17.6B-CI) C.G. S.X.
0.17 2e-6 52 Hordeum vulgare Contig2002_at Contig2002 - - 6e-6 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.22 8e-9 61 Oryza sativa Os03g0267200 AK069547.1 - - 7e-9 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.17 2e-2 40 Populus trichocarpa PtpAffx.209307.1.S1_s_at pmrna18395 hypothetical protein - 3e-8 At1g07400 17.8 kDa class I heat shock protein (HSP17.8-CI) C.G. S.X.
0.15 1e-9 63 Triticum aestivum TaAffx.73024.1.S1_at CD903329 - - 2e-9 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.34 1e-9 61 Vitis vinifera 1621652_at CF518056 hypothetical protein LOC100262206 - 6e-9 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.18 3e-14 77 Zea mays Zm.2361.1.A1_at BM381388 hypothetical protein LOC100191552 - 3e-17 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0010286 Any process that increases heat tolerance of an organism in response to high temperatures.
X GO:0009408 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
X GO:0009644 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
X GO:0042542 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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