Gene omics information

Query gene ID At5g59520
Gene name ZIP2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6277.3At5g59520836071ZIP2encodes a metal ion transporter whose expression is regulated by copper.S.X.H.G.
0.6579.6At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFS.X.H.G.
0.5873.8At4g05200825868protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5773.8At3g01420821135DOX1Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.S.X.H.G.
0.5773.8At4g37010829855caltractin, putative / centrin, putativeF:calcium ion binding;P:biological_process unknown;C:unknown;MFPOBS.X.H.G.
0.5469.5At5g63600836480FLS5 (FLAVONOL SYNTHASE 5)encodes a protein whose sequence is similar to flavonol synthaseS.X.H.G.
0.5368.6At5g65210836646TGA1F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POMS.X.H.G.
0.5166.3At3g25930822190universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;PS.X.H.G.
0.4862.5At5g50760835148auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POS.X.H.G.
0.4761.2At4g37060829860PLP5 (PATATIN-LIKE PROTEIN 5)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOMFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
54.999.8GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
46.699.8GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)
42.899.8GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)
42.299.8GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)
41.799.8GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
37.799.7GSM131457AtGen_6-9821_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
36.699.7GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
36.499.7GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)
36.199.7GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
35.499.7GSM291112root - 21% oxygen - 30min - CGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At5g04140830292GLU1 (GLUTAMATE SYNTHASE 1)Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.C.G.S.X.
0.015e-136At5g02500831020HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)encodes a member of heat shock protein 70 family.C.G.S.X.
0.035e-136At5g49525835013unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.035e-136At3g02500821065unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.015e-136At1g22000838803F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBAVC.G.S.X.
0.025e-136At1g23710838981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBC.G.S.X.
0.015e-136At1g74720843811C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-138Glycine maxGmaAffx.112.1.S1_atAI966759--7e-2At4g26650RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.023e-136Hordeum vulgareContig7844_atContig7844--3e-1At5g23660MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)C.G.S.X.
0.051e-346Oryza sativaOs01g0972200AY302058.1-Zinc transporter 2 precursor (ZRT/IRT-like protein2)7e-4At5g59520ZIP2C.G.S.X.
0.067e-136Populus trichocarpaPtp.7632.1.S1_atDN497977ZIP transporter-2e-1At5g59520ZIP2C.G.S.X.
0.041e-138Triticum aestivumTaAffx.119182.1.A1_atBJ284911--3e-2At5g59520ZIP2C.G.S.X.
0.067e-754Vitis vinifera1608259_atCF205412.1hypothetical protein LOC100255358-2e-6At5g59520ZIP2C.G.S.X.
0.034e+032Zea maysZm.8285.1.S1_atCA826983hypothetical protein LOC100276185-6e-3At4g10810unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006829The directed movement of zinc (Zn) ions into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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