Gene omics information

Query gene ID At5g59090
Gene name ATSBT4.12
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At5g59090836026ATSBT4.12F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, nucleus, cytoplasm;BPOFAMS.X.H.G.
0.8089.8At2g31085817664CLE6 (CLAVATA3/ESR-RELATED 6)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo.S.X.H.G.
0.5368.6At5g56540835755AGP14 (ARABINOGALACTAN PROTEIN 14)Encodes arabinogalactan protein (AGP14).S.X.H.G.
0.5065.3At4g18510827583CLE2 (CLAVATA3/ESR-RELATED)CLE2, putative ligand, member of large gene family homologous to Clavata3S.X.H.G.
0.2930.3At3g45700823712proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PMBOFS.X.H.G.
0.1811.4At5g46890834734protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.114.1At4g23690828469disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
178.1100.0GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
146.899.9GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
127.899.9GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
83.299.9GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
74.899.9GSM226550Slice8JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
58.499.8GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
52.599.8GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
49.099.8GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
43.199.8GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
40.499.8GSM142752MJ001_ATH1_A3-jones-rh1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8501969At5g59120836030ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.621e-163577At5g58820835999subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.602e-153543At5g58840836001subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.523e-106387At5g58830836000identical protein binding / serine-type endopeptidaseF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.572e-42174At5g59130836031subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.364e-37157At5g59100836027subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.259e-23109At3g46850823838subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-138Glycine maxGmaAffx.77021.1.S1_atBU546763--2e-6At2g39850identical protein binding / serine-type endopeptidaseC.G.S.X.
0.018e+032Hordeum vulgareContig12013_s_atContig12013--3e+0At5g38080unknown proteinC.G.S.X.
0.042e+036Oryza sativaOs02g07800009630.m05340--3e-1At5g59090ATSBT4.12C.G.S.X.
0.076e-344Populus trichocarpaPtpAffx.224443.1.S1_atpmrna42993hypothetical protein-3e-4At5g59190subtilase family proteinC.G.S.X.
0.011e+036Triticum aestivumTa.18602.1.S1_atCA639520--7e-1At2g32720CB5-B (CYTOCHROME B5 ISOFORM B)C.G.S.X.
0.018e-238Vitis vinifera1616198_atCF405950hypothetical protein LOC100242144-1e-7At1g28370ERF11 (ERF DOMAIN PROTEIN 11)C.G.S.X.
0.027e+032Zea maysZm.75.1.A1_atCD997036adenine nucleotide translocator-4e-117At3g08580AAC1 (ADP/ATP CARRIER 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
LGO:0043086Any process that stops or reduces the activity of an enzyme.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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