Gene omics information

Query gene ID At5g58120
Gene name disease resistance protein (TIR-NBS-LRR class), putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7888.6At5g58120835924disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAS.X.H.G.
0.5570.6At2g24600816996ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAS.X.H.G.
0.4761.2At3g45640823706ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3)Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.S.X.H.G.
0.4558.3At4g34150829563C2 domain-containing proteinF:unknown;P:response to cold;C:unknown;MPFOBVAS.X.H.G.
0.4355.3At1g72900843621disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOS.X.H.G.
0.4355.3At2g26190817159calmodulin-binding family proteinF:calmodulin binding;P:N-terminal protein myristoylation;C:unknown;PFOBS.X.H.G.
0.4355.3At1g27770839670ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.S.X.H.G.
0.4253.9At1g55450841992embryo-abundant protein-relatedF:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOAS.X.H.G.
0.4253.9At5g66210836753CPK28member of Calcium Dependent Protein KinaseS.X.H.G.
0.4050.8At4g14365827080zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
68.999.9GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
63.999.8GSM142653MC002_ATH1_A11.1-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
58.399.8GSM339543Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -5GSE13469Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
57.599.8GSM131411AtGen_6-8715_Woundingstress-Shoots-0.25h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)
53.299.8GSM142654MC002_ATH1_A11.2-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
46.699.8GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
45.199.8GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
43.499.8GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
43.399.8E-MEXP-807-raw-cel-1173273144
43.399.8GSM131490ATGE_100_BGSE5629AtGenExpress: Developmental series (seedlings and whole plants)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.5201029At1g63730842677disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response;C:intrinsic to membrane;PMBOAFC.G.S.X.
0.480831At1g63740842678disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.252e-147523At4g14370827081phosphoinositide bindingF:phosphoinositide binding;P:signal transduction, defense response;C:intrinsic to membrane;PMOBFVAC.G.S.X.
0.541e-139498At1g63750842679ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein bindingF:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVAC.G.S.X.
0.412e-129464At1g64070842711RLM1 (RESISTANCE TO LEPTOSPHAERIA MACULANS 1)Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.C.G.S.X.
0.306e-108393At1g56540842107disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.512e-83311At1g63880842692disease resistance protein (TIR-NBS-LRR class), putativeEncodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-138Glycine maxPsAffx.CL2421Contig1_s_atPsAffx.CL2421Contig1--1e-2At3g06090unknown proteinC.G.S.X.
0.012e-138Hordeum vulgareHVSMEn0019B10f2_s_atHVSMEn0019B10f2--1e-1At2g30960unknown proteinC.G.S.X.
0.015e-242Oryza sativaOsAffx.23713.1.S1_at---0C.G.S.X.
0.014e-242Populus trichocarpaPtpAffx.215300.1.S1_atpmrna29397hypothetical protein-2e+0At2g03930-C.G.S.X.
0.012e+036Triticum aestivumTaAffx.106000.1.S1_atCA726764--4e+0At1g67590remorin family proteinC.G.S.X.
0.033e-240Vitis vinifera1616027_atAY427180.1--3e-4At4g16990RLM3 (RESISTANCE TO LEPTOSPHAERIA MACULANS 3)C.G.S.X.
0.013e+034Zea maysZm.8561.2.A1_a_atBM332166hypothetical protein LOC100277438-4e+0At4g05070unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
LGO:0045087Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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