Gene omics information

Query gene ID At5g58100
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g58100835922unknown proteinF:unknown;P:pollen exine formation;C:unknown;POABS.X.H.G.
0.6680.1At5g06120830499Ran-binding protein, putativeF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOPS.X.H.G.
0.6579.6At2g25760817118protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MBOPFVAS.X.H.G.
0.6579.6At2g46560819268transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex;BFMOPS.X.H.G.
0.6478.9At5g38880833879unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAS.X.H.G.
0.6378.1At5g27970832867bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MFOPBS.X.H.G.
0.6378.1At1g80930844433MIF4G domain-containing protein / MA3 domain-containing proteinF:protein binding, RNA binding, binding;P:translation, RNA metabolic process;C:cytosol, nucleus;MOFBPVAS.X.H.G.
0.6176.7At5g15680831422bindingF:binding;P:biological_process unknown;C:plasma membrane, membrane;MFPOS.X.H.G.
0.5873.8At2g36720818244PHD finger transcription factor, putativeF:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPFOS.X.H.G.
0.5773.8At3g33530823149transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:chloroplast;MOPFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.499.3GSM142645MC002_ATH1_A8.2-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.599.3GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
11.299.2GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.799.2GSM142646MC002_ATH1_A8.3-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.999.1GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.899.1GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.899.1GSM134204Murray_3-2_D3-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
9.799.1GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.599.1GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.599.1GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.019e-240At5g58410835954binding / protein binding / zinc ion bindingF:protein binding, binding, zinc ion binding;P:unknown;C:unknown;MFOPBC.G.S.X.
0.014e-138At5g36700833635PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1)F:phosphoglycolate phosphatase activity;P:metabolic process;C:chloroplast stroma, chloroplast;BOMFAPC.G.S.X.
0.014e-138At5g36790833646phosphoglycolate phosphatase, putativeF:hydrolase activity, phosphatase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:apoplast, nucleus, chloroplast stroma, vacuole, cytoplasm;BOMFAPC.G.S.X.
0.014e-138At5g02030831745RPL (REPLUMLESS)Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.C.G.S.X.
0.014e-138At4g33750---C.G.S.X.
0.014e-138At2g05230815071DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.166e-47190Glycine maxGma.8209.1.S1_atBU546771--2e-47At5g58100unknown proteinC.G.S.X.
0.013e+034Hordeum vulgareEBem10_SQ004_H14_atEBem10_SQ004_H14--5e+0At2g42390protein kinase C substrate, heavy chain-relatedC.G.S.X.
0.071e-554Oryza sativaOs02g0469200AK066401.1-Conserved hypothetical protein7e-6At5g58100unknown proteinC.G.S.X.
0.386e-53210Populus trichocarpaPtpAffx.217252.1.S1_atpmrna32439hypothetical protein-3e-53At5g58100unknown proteinC.G.S.X.
0.082e-656Triticum aestivumTaAffx.51901.1.S1_atCA716758--2e-7At5g58100unknown proteinC.G.S.X.
0.011e-138Vitis vinifera1607435_atCF513118--2e-2At2g23755unknown proteinC.G.S.X.
0.012e-138Zea maysZmAffx.189.2.S1_a_atAI668397--8e-1At1g70510KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010584The formation of the pollen exine. The reticulate pollen wall pattern consists of two layers, exine and intine.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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