Gene omics information

Query gene ID At5g57480
Gene name AAA-type ATPase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5873.8At5g57480835852AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVS.X.H.G.
0.6781.6At5g40680834068kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPOBFAS.X.H.G.
0.6176.7At1g34410840344ARF21 (AUXIN RESPONSE FACTOR 21)F:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.6176.7At2g23250816857UGT84B2 (UDP-glucosyl transferase 84B2)F:UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVFOS.X.H.G.
0.5873.8At1g34170840316transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.5673.0At2g17750816284unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBS.X.H.G.
0.5368.6At3g27785822399MYB118putative transcription factor (MYB118)S.X.H.G.
0.5267.4At1g79330844271ATMC5 (ARABIDOPSIS THALIANA METACASPASE 5)Metacaspase AtMCPb2/AMC6. Caspase family protein. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain.S.X.H.G.
0.5065.3At2g34990818063zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBS.X.H.G.
0.4761.2At2g19500816469CKX2 (CYTOKININ OXIDASE 2)It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
647.8100.0GSM284386Arabidopsis GSUS3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
254.3100.0GSM284389Arabidopsis GMPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
249.5100.0GSM284388Arabidopsis GMPE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
234.7100.0GSM284387Arabidopsis GSUS4bGSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
103.599.9GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
103.299.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
99.099.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
98.399.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
87.099.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
86.199.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.672e-152539At4g25835828689AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.382e-41171At4g30250829148ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.062e-1687At2g18193816333AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.066e-1479At2g18190816332AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to salt stress;C:endomembrane system;BOMFPAVC.G.S.X.
0.072e-1377At5g40000833997AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.044e-1273At3g50930824257BCS1 (CYTOCHROME BC1 SYNTHESIS)F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:mitochondrion, plastid;BOMFPAVC.G.S.X.
0.032e-1067At5g17740831642AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVC.G.S.X.
0.111e-861At3g28570822487AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.105e-1583Glycine maxGmaAffx.2047.1.S1_atCA801759--2e-14At3g28570AAA-type ATPase family proteinC.G.S.X.
0.021e-138Hordeum vulgareContig17501_atContig17501--3e-2At5g67520adenylylsulfate kinase, putativeC.G.S.X.
0.024e-138Oryza sativaOs05g0588800AK111042.1--1e-4At5g17750AAA-type ATPase family proteinC.G.S.X.
0.408e-51202Populus trichocarpaPtpAffx.215296.1.S1_atpmrna29393hypothetical protein-5e-51At5g57480AAA-type ATPase family proteinC.G.S.X.
0.028e-136Triticum aestivumTaAffx.120056.1.S1_atBJ246014--9e-1At3g21590-C.G.S.X.
0.111e-344Vitis vinifera1610294_atCF373126--4e-13At4g25835AAA-type ATPase family proteinC.G.S.X.
0.021e+034Zea maysZm.5488.1.S1_atCF623713hypothetical protein LOC100276754-1e-1At1g64490unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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