Gene omics information

Query gene ID At5g57150
Gene name basic helix-loop-helix (bHLH) family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g57150835821basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMVOS.X.H.G.
0.5368.6At1g17340838305phosphoinositide phosphatase family proteinF:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;P:unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.4862.5At4g40080830171epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, binding;P:biological_process unknown;C:chloroplast;PMOS.X.H.G.
0.4659.8At3g12040820378DNA-3-methyladenine glycosylase (MAG)F:DNA binding, alkylbase DNA N-glycosylase activity, catalytic activity;P:base-excision repair;C:cellular_component unknown;BOMAPFS.X.H.G.
0.4253.9At2g20010816520-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4152.4At1g64200842725VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3)F:proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPABS.X.H.G.
0.4050.8At1g06870837198signal peptidase, putativeF:serine-type peptidase activity, peptidase activity;P:proteolysis;C:membrane;BOMPFS.X.H.G.
0.3745.0At5g35200833474epsin N-terminal homology (ENTH) domain-containing proteinF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:plasma membrane;MPFOBS.X.H.G.
0.3541.6At4g33430829480BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.S.X.H.G.
0.3541.6At3g60130825183BGLU16 (BETA GLUCOSIDASE 16)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:unknown;BOPMFAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
61.599.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responses
32.599.7GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
31.399.7GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.
28.599.7GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responses
27.199.7GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.307e-1271At4g29930829116basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMVBOC.G.S.X.
0.042e-654At2g28160817362FRU (FER-LIKE REGULATOR OF IRON UPTAKE)Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.C.G.S.X.
0.022e-240At1g12860837843SCRM2 (SCREAM 2)Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation.C.G.S.X.
0.039e-238At2g46510819262ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-963Glycine maxGma.12279.1.A1_atCD397826--2e-9At5g57150basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.027e-134Hordeum vulgareContig18412_atContig18412--4e-16At1g17720ATB BETAC.G.S.X.
0.043e+034Oryza sativaOs04g02649009632.m01765--6e+0At4g18501unknown proteinC.G.S.X.
0.166e-1375Populus trichocarpaPtpAffx.5960.2.S1_atBU813783hypothetical protein-6e-13At5g57150basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.034e-136Triticum aestivumTaAffx.129210.1.S1_atBJ314372--3e-1At5g57150basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.067e-340Vitis vinifera1617411_atBQ797398hypothetical protein LOC100244514-2e-2At5g57150basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.031e+130Zea maysZm.942.1.A1_atBF729545seed maturation protein-3e-1At2g33735DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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