Gene omics information

Query gene ID At5g57100
Gene name transporter-related
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5166.3At5g20540832176ATBRXL4 (BREVIS RADIX-LIKE 4)Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.S.X.H.G.
0.4862.5At5g25080832579-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.4862.5At3g53540824522unknown proteinF:unknown;P:unknown;C:plasma membrane;OMBFPAVS.X.H.G.
0.4862.5At5g25170832588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOFS.X.H.G.
0.4558.3At5g25150832586TAF5 (TBP-ASSOCIATED FACTOR 5)Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).S.X.H.G.
0.4457.2At5g19480832068unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAS.X.H.G.
0.4457.2At2g27100817252SE (SERRATE)Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.S.X.H.G.
0.4457.2At2g03780814905translin family proteinF:sequence-specific DNA binding, DNA binding;P:biological_process unknown;C:unknown;MFAOPS.X.H.G.
0.4253.9At2g01820814713leucine-rich repeat protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:pollen development;C:plasma membrane, plant-type cell wall;MPOBFVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
98.799.9GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
67.099.8GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At4g32551829390LUG (LEUNIG)LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.C.G.S.X.
0.021e-138At2g20880816622AP2 domain-containing transcription factor, putativeF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, cytoplasm;POMBFVC.G.S.X.
0.011e-138At1g35520840447ARF15 (AUXIN RESPONSE FACTOR 15)F:transcription factor activity;P:regulation of transcription;C:nucleus;PC.G.S.X.
0.026e-136At5g15820831439zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBC.G.S.X.
0.016e-136At5g19090832028heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.016e-136At5g25110832582CIPK25 (CBL-INTERACTING PROTEIN KINASE 25)member of AtCIPKsC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-138Glycine maxHgAffx.10903.1.S1_atCB378235--8e-5At1g22330RNA binding / nucleic acid binding / nucleotide bindingC.G.S.X.
0.023e-136Hordeum vulgareContig16374_atContig16374--1e+0At3g42940-C.G.S.X.
0.031e+036Oryza sativaOsAffx.26898.1.S1_at---0C.G.S.X.
0.172e-26121Populus trichocarpaPtp.2815.1.S1_atDN485926hypothetical protein-1e-26At5g57100transporter-relatedC.G.S.X.
0.032e+034Triticum aestivumTaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3C.G.S.X.
0.022e-136Vitis vinifera1613372_atCF514636similar to P-glycoprotein-2e-5At1g06070bZIP transcription factor, putative (bZIP69)C.G.S.X.
0.021e+034Zea maysZm.6506.1.A1_a_atAI714910replication protein A 70 kDa DNA-binding subunit-1e-10At5g08020RPA70B (RPA70-KDA SUBUNIT B)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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