Gene omics information

Query gene ID At5g56370
Gene name F-box family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At5g56370835738F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At3g26010822198F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3541.6At5g07060830597zinc finger (CCCH-type) family proteinF:RNA binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;FMOPVS.X.H.G.
0.3338.1At5g25290832601F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2115.8At1g77655844101unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
372.3100.0GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
346.8100.0GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
279.0100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
277.3100.0GSM133958Fukuda_1-3_2A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
267.0100.0GSM133959Fukuda_1-4_2B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
261.5100.0GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
255.0100.0GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
227.7100.0GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
226.6100.0GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
226.3100.0GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.065e-1169At3g52670824433F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.055e-1169At3g52680824434F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.043e-963At5g50270835092F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.041e-861At3g49020824063F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;PMC.G.S.X.
0.032e-757At3g26920822308-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFC.G.S.X.
0.073e-654At4g00160828180F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-654At3g49030824064F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxHgAffx.2672.1.S1_atCK350018--3e+0At5g3985040S ribosomal protein S9 (RPS9C)C.G.S.X.
0.021e+034Hordeum vulgareHV_CEa0008M22r2_atHV_CEa0008M22r2--4e+0At5g14290-C.G.S.X.
0.021e+036Oryza sativaOsAffx.16389.1.S1_at---0C.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.6010.1.A1_atCV225378--4e+0At4g21780unknown proteinC.G.S.X.
0.023e+034Triticum aestivumTa.25596.3.A1_atCA638037--5e-6At3g24503ALDH2C4C.G.S.X.
0.033e+032Vitis vinifera1611895_atCF210985similar to putative chorismate mutase-7e-3At1g69370CM3 (chorismate mutase 3)C.G.S.X.
0.024e-342Zea maysZm.9365.1.A1_atBM268346transposon protein-1e-1At1g29520AWPM-19-like membrane family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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