Gene omics information

Query gene ID At5g56110
Gene name ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g56110835710ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2.S.X.H.G.
0.5673.0At5g52460835322EDA41 (embryo sac development arrest 41)F:unknown;P:polar nucleus fusion;C:cellular_component unknown;PS.X.H.G.
0.5570.6At4g03950825705glucose-6-phosphate/phosphate translocator, putativeF:glucose-6-phosphate transmembrane transporter activity, glucose transmembrane transporter activity;P:hexose phosphate transport;C:unknown;PMOFBS.X.H.G.
0.4659.8At5g22680832331-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.4050.8At3g15910820834unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3133.8At3g57440824911unknown proteinF:unknown;P:unknown;C:unknown;PS.X.H.G.
0.2726.2At3g42820823326transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.2522.6At2g35460818111harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
408.6100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
241.0100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
234.5100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
130.499.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
123.399.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
121.099.9GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
115.599.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
104.199.9GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
69.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
59.399.8GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.158e-961At4g05100825855AtMYB74 (myb domain protein 74)Member of the R2R3 factor gene family.C.G.S.X.
0.048e-961At3g61250825297AtMYB17 (myb domain protein 17)Member of the R2R3 factor gene family.C.G.S.X.
0.138e-961At2g36890818262RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)"Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. "C.G.S.X.
0.061e-757At5g65790836708MYB68 (MYB DOMAIN PROTEIN 68)Encodes a putative MYB transcription factor.C.G.S.X.
0.045e-756At5g65230836648AtMYB53 (myb domain protein 53)Member of the R2R3 factor gene family.C.G.S.X.
0.055e-756At4g37780829934MYB87 (MYB DOMAIN PROTEIN 87)"encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family."C.G.S.X.
0.045e-756At2g31180817674MYB14 (MYB DOMAIN PROTEIN 14)Member of the R2R3 factor gene family.C.G.S.X.
0.022e-654At3g27785822399MYB118putative transcription factor (MYB118)C.G.S.X.
0.042e-654At3g49690824131MYB84 (MYB DOMAIN PROTEIN 84)"Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-757Glycine maxGmaAffx.37381.1.S1_atBG790575MYB transcription factor MYB77-2e-51At4g05100AtMYB74 (myb domain protein 74)C.G.S.X.
0.022e-136Hordeum vulgareContig22343_atContig22343--2e-6At2g24240potassium channel tetramerisation domain-containing proteinC.G.S.X.
0.187e-2099Oryza sativaOs04g04706009632.m03741-Myb-related transcription factor LBM24e-20At5g56110ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)C.G.S.X.
0.481e-66254Populus trichocarpaPtpAffx.201487.1.S1_atpmrna2925hypothetical protein-4e-67At5g56110ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)C.G.S.X.
0.043e-240Triticum aestivumTaAffx.118879.1.S1_s_atBJ304280--2e-1At5g11930glutaredoxin family proteinC.G.S.X.
0.041e-136Vitis vinifera1614953_atCF519173R2R3 Myb30 transcription factor-4e-33At3g47600ATMYB94 (MYB DOMAIN PROTEIN 94)C.G.S.X.
0.028e-134Zea maysZm.911.1.A1_atBM378474hypothetical protein LOC100277236-6e-3At2g35960NHL12C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010090The process by which the structures of a hair cell (trichome) cell are generated and organized. This process occurs while the initially relatively unspecialized epidermal cell is acquiring the specialized features of a hair cell. An example of this process is found in Arabidopsis thaliana.
XGO:0048658The process whose specific outcome is the progression of the tapetal layer over time, from its formation to the mature structure.
SGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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