CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g55320

Gene name membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.67 81.6 At5g55320 835625 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related F:acyltransferase activity;P:unknown;C:unknown;BPOF S.X. H.G.
0.89 94.6 At5g46040 834645 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;BPMOF S.X. H.G.
0.67 81.6 At1g19190 838502 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPMFAV S.X. H.G.
0.67 81.6 At3g59030 825072 TT12 (TRANSPARENT TESTA 12) Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds. S.X. H.G.
0.50 65.3 At1g09790 837508 COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR) F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P S.X. H.G.
0.40 50.8 At3g17600 821026 IAA31 (INDOLE-3-ACETIC ACID INDUCIBLE 31) Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA31 shares several residues with the conserved domain II region, believed to act as a degron in many of the rapidly degraded Aux/IAA family members. An IAA31 fusion protein is quite long-lived, but can be degraded more rapidly in the presence of auxin. Unlike many other family members, IAA31 transcript levels do not rise in response to auxin. Nevertheless, overexpression of IAA31 leads to defects in auxin-related processes such as gravitropism, root development, shoot development, and cotyledon vascular development. S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
413.6 100.0 GSM147964 WT Globular Stage Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
325.0 100.0 GSM147963 WT Globular Stage Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
295.9 100.0 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
261.2 100.0 GSM147966 lec1-1 Globular Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
151.8 99.9 GSM10479 lec1-1 Cotyledon Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
146.1 99.9 GSM147965 lec1-1 Globular Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
140.7 99.9 GSM284397 Arabidopsis GGSc1 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
86.0 99.9 GSM10480 lec1-1 Cotyledon Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
79.9 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
79.1 99.9 GSM311284 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.26 3e-24 113 At1g34520 840354 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF C.G. S.X.
0.28 6e-22 105 At1g34490 840351 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF C.G. S.X.
0.20 2e-16 87 At5g55330 835626 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related F:acyltransferase activity;P:biological_process unknown;C:thylakoid;BPOF C.G. S.X.
0.34 6e-16 85 At5g55350 835628 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF C.G. S.X.
0.32 2e-15 83 At5g55360 835629 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF C.G. S.X.
0.30 2e-15 83 At1g34500 840352 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BOPF C.G. S.X.
0.33 4e-11 69 At5g55340 835627 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF C.G. S.X.
0.24 2e-9 63 At5g51420 835216 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:unknown;C:unknown;PBO C.G. S.X.
0.08 1e-4 48 At5g55380 835631 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Glycine max GmaAffx.63567.1.S1_at BG362679 - - 9e-1 At4g37280 MRG family protein C.G. S.X.
0.03 1e+0 34 Hordeum vulgare Contig20269_at Contig20269 - - 1e+0 At5g55320 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related C.G. S.X.
0.03 3e-1 38 Oryza sativa Os07g0133200 9635.m00340 - - 9e-1 At1g33860 unknown protein C.G. S.X.
0.05 2e-1 38 Populus trichocarpa Ptp.7584.1.A1_s_at CV251166 hypothetical protein - 2e-6 At3g51970 AtSAT1 (Arabidopsis thaliana sterol O-acyltransferase 1) C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.111882.1.S1_at CA631302 - - 4e-1 At5g64090 - C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1612788_at CB910566 - - 6e+0 At5g42242 LCR57 (Low-molecular-weight cysteine-rich 57) C.G. S.X.
0.02 9e-1 34 Zea mays Zm.8161.1.S1_at CB816742 - - 1e+0 At3g48040 ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00040 Fatty acid elongation and wax biosynthesis

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage