Gene omics information

Query gene ID At5g55290
Gene name ATP synthase subunit H family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At5g55290835622ATP synthase subunit H family proteinF:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOFS.X.H.G.
0.4862.5At5g48810834939CB5-D (CYTOCHROME B5 ISOFORM D)Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.S.X.H.G.
0.4659.8At4g02620828221vacuolar ATPase subunit F family proteinF:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole;MFOPAS.X.H.G.
0.4253.9At2g03680814896SPR1 (SPIRAL1)The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends, separated by a predicted rod-like domain, suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis; expressed in transgenic seedlings localized to microtubules within the cortical array, preprophase band, phragmoplast, and mitotic spindle.S.X.H.G.
0.4050.8At1g01230839331ORMDL family proteinF:molecular_function unknown;P:protein folding;C:integral to membrane, endoplasmic reticulum;MFPOS.X.H.G.
0.4050.8At5g64400836561-F:molecular_function unknown;P:biological_process unknown;C:unknown;MFPOBS.X.H.G.
0.3948.4At3g08610820008unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, respiratory chain complex I;PS.X.H.G.
0.3846.7At2g33470817912GLTP1 (glycolipid transfer protein 1)F:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:plasma membrane;MFPOS.X.H.G.
0.3745.0At2g20930816627-F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:intracellular;MFOPS.X.H.G.
0.3643.6At5g59880836110ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)Encodes actin depolymerizing factor 3 (ADF3).S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.599.7GSM133781Lindsey_1-6_globular-basal_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
17.099.5GSM133776Lindsey_1-1_globular-apical_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.699.4GSM134513Col-0_4day_dark_-lincomycin_rep1GSE5759red illumination w/o lincomycin
11.599.3GSM173447oxt6 mutant, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
10.599.2GSM173446oxt6 mutant, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
9.999.1GSM134519Col-0_4day_red illumination_+lincomycin_rep1GSE5759red illumination w/o lincomycin
8.799.0GSM134520Col-0_4day_red illumination _+lincomycin_rep2GSE5759red illumination w/o lincomycin
8.799.0GSM134516Col-0_4day_dark_+lincomycin_rep2GSE5759red illumination w/o lincomycin
8.098.9GSM134518Col-0_4day_red illumination_-lincomycin_rep2GSE5759red illumination w/o lincomycin
6.998.7GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.612e-37155At4g26710828778ATP synthase subunit H family proteinF:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOFC.G.S.X.
0.022e-342At1g73670843702ATMPK15member of MAP KinaseC.G.S.X.
0.034e-134At3g20800821628rcd1-like cell differentiation protein, putativeF:molecular_function unknown;P:multicellular organismal development;C:cellular_component unknown;MFOPC.G.S.X.
0.032e+032At5g40660834066ATP12 protein-relatedF:protein binding;P:proton-transporting ATP synthase complex assembly;C:cellular_component unknown;BOMFPC.G.S.X.
0.022e+032At5g18490831967unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMBOC.G.S.X.
0.022e+032At4g10180826609DET1 (DE-ETIOLATED 1)Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.C.G.S.X.
0.022e+032At1g35540840450ARF14 (AUXIN RESPONSE FACTOR 14)F:transcription factor activity;P:regulation of transcription;C:nucleus;PBC.G.S.X.
0.012e+032At1g27595839651-F:unknown;P:unknown;C:unknown;OMFPBC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.242e-1065Glycine maxGmaAffx.92523.1.S1_atCF808248--7e-8At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.122e-444Hordeum vulgareContig6470_atContig6470--1e-3At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.252e-1065Oryza sativaOs04g0660600AK120899.1-ATP synthase subunit H family protein3e-10At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.252e-1995Populus trichocarpaPtp.6175.1.S1_a_atCV249693hypothetical protein-4e-19At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.142e-342Triticum aestivumTa.5109.3.S1_atCA697843Plasma membrane H+-ATPase subunit H-9e-6At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.304e-2095Vitis vinifera1612654_atCA809225hypothetical protein LOC100256926-3e-19At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.041e+128Zea maysZmAffx.599.1.S1_atAI715027--3e+0At5g48820ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0015991The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00190Link to KEGG PATHWAYOxidative phosphorylation
01100Link to KEGG PATHWAYMetabolic pathways
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage