Gene omics information

Query gene ID At5g55000
Gene name FIP2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g55000835591FIP2FH protein interacting protein FIP2S.X.H.G.
0.4457.2At5g04910830373unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.4050.8At2g25280817066-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BAMOFPS.X.H.G.
0.3948.4At1g61150842408-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.3643.6At5g60620836183phospholipid/glycerol acyltransferase family proteinF:acyltransferase activity;P:triglyceride biosynthetic process, diacylglycerol biosynthetic process, metabolic process;C:plasma membrane, membrane;MOBPFS.X.H.G.
0.3338.1At1g20575838646dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putativeF:elongation factor-2 kinase activity, dolichyl-phosphate beta-D-mannosyltransferase activity;P:protein amino acid glycosylation;C:endoplasmic reticulum;BOAMFPVS.X.H.G.
0.3338.1At4g38800830035ATMTN1F:methylthioadenosine nucleosidase activity, catalytic activity;P:nucleoside metabolic process;C:plasma membrane;BOPS.X.H.G.
0.3032.1At3g18430821372calcium-binding EF hand family proteinF:calcium ion binding;P:N-terminal protein myristoylation;C:vacuole;MPOFBS.X.H.G.
0.2930.3At2g17390816246AKR2B (ANKYRIN REPEAT-CONTAINING 2B)Highly homologous to AKR2A. Involved in chloroplast biogenesis. Double mutants of AKR2A and AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.S.X.H.G.
0.2726.2At3g54480824613SKIP5 (SKP1/ASK-INTERACTING PROTEIN 5)Encodes an SKP1 interacting partner (SKIP5).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.499.4GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.099.4GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
11.999.3GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
10.799.2GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.999.1GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.599.1GSM133756Lindsey_1-10_heart-stage-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.499.1GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.299.1GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
8.899.0GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
8.699.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.013e-240At3g51290824292proline-rich family proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOBFVAC.G.S.X.
0.001e-138At5g40450834043unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, plasma membrane;MOBFPAVC.G.S.X.
0.012e+034At5g19390832059pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing proteinEncodes a protein with similarity to REN1, a Rho GTPase activating protein.C.G.S.X.
0.012e+034At5g62230836344ERL1 (ERECTA-LIKE 1)Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.273e-27123Glycine maxGmaAffx.85638.1.S1_atBF425777--4e-13At5g55000FIP2C.G.S.X.
0.033e+032Hordeum vulgareHR01A09u_atHR01A09u--2e+0At5g55000FIP2C.G.S.X.
0.038e-136Oryza sativaOsAffx.18461.1.S1_at---0C.G.S.X.
0.432e-31137Populus trichocarpaPtpAffx.30748.1.A1_a_atCV256204hypothetical protein-2e-31At5g55000FIP2C.G.S.X.
0.037e+032Triticum aestivumTaAffx.5029.1.S1_atCA724834--3e+0At5g55000FIP2C.G.S.X.
0.359e-49192Vitis vinifera1609387_atCB978426similar to FIP2 (FH protein interacting protein 2); voltage-gated potassium channel-4e-48At5g55000FIP2C.G.S.X.
0.031e+130Zea maysZmAffx.1341.1.S1_at11990232-89--2e-119Atcg01090-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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