Gene omics information

Query gene ID At5g54040
Gene name DC1 domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6176.7At5g54040835487DC1 domain-containing proteinF:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOFS.X.H.G.
0.8089.8At5g38540833842jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5570.6At1g64910842799glycosyltransferase family proteinF:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBOFS.X.H.G.
0.5065.3At1g64920842800glycosyltransferase family proteinF:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFOS.X.H.G.
0.5065.3At5g43690834389sulfotransferase family proteinF:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBFS.X.H.G.
0.5065.3At5g48175834870unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.3235.7At1g24320839048alpha-glucosidase, putativeF:mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity;P:oligosaccharide metabolic process;C:cellular_component unknown;MFOBPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
229.0100.0GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
146.699.9GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
128.899.9GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
117.499.9GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
105.399.9GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
102.899.9GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
97.499.9GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
90.999.9GSM184487Epidermis&Cortex root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
80.099.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
47.599.8GSM218586Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.510920At5g54030835486DC1 domain-containing proteinF:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOC.G.S.X.
0.620878At5g54050835488DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOFC.G.S.X.
0.570755At5g54020835485zinc ion bindingF:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFC.G.S.X.
0.570694At5g29624833061DC1 domain-containing proteinF:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFC.G.S.X.
0.544e-160565At4g14980827157-F:unknown;P:intracellular signaling cascade;C:unknown;POMFC.G.S.X.
0.481e-123444At5g44770834506DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMOC.G.S.X.
0.451e-92341At2g04500814991DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;POMC.G.S.X.
0.138e-26119At3g06990819884DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POMC.G.S.X.
0.115e-21103At3g07000819885DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e-240Glycine maxGma.17894.1.S1_atCD393748--1e+0At5g10680calmodulin-binding protein-relatedC.G.S.X.
0.022e+034Hordeum vulgareContig15332_atContig15332--6e-12At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
0.012e+036Oryza sativaOs11g0677400AK069580.1-Hypothetical protein2e-1At4g02871unknown proteinC.G.S.X.
0.023e-138Populus trichocarpaPtpAffx.216639.1.S1_atpmrna31554hypothetical protein-1e+0At4g10000electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.021e-242Triticum aestivumTa.15530.1.A1_atCA485338--4e+0At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)C.G.S.X.
0.023e-136Vitis vinifera1609653_atBQ797078hypothetical protein LOC100244735-1e-1At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.032e+034Zea maysZm.17055.1.S1_atCF972499--2e-2At1g12665-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0007242A series of reactions within the cell that occur as a result of a single trigger reaction or compound.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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