Gene omics information

Query gene ID At5g53980
Gene name ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4355.3At5g53980835481ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.S.X.H.G.
0.8994.6At5g44440834471FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMS.X.H.G.
0.8994.6At5g57240835830ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOPS.X.H.G.
0.7586.9At4g14130827051XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)xyloglucan endotransglycosylase-related protein (XTR7)S.X.H.G.
0.7586.9At5g54190835507PORAlight-dependent NADPH:protochlorophyllide oxidoreductase AS.X.H.G.
0.7184.2At4g35720829724unknown proteinF:unknown;P:unknown;C:unknown;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
214.6100.0E-MEXP-715-raw-cel-1121836087
170.9100.0E-MEXP-715-raw-cel-1121836361
161.099.9E-MEXP-715-raw-cel-1121836113
154.499.9E-MEXP-715-raw-cel-1121835979
143.899.9E-MEXP-715-raw-cel-1121836005
123.199.9E-MEXP-715-raw-cel-1121836247
117.499.9E-MEXP-715-raw-cel-1121836221
116.899.9E-MEXP-1112-raw-cel-1590665533
113.499.9GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatments
100.599.9GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-550At1g27050839594ATHB54 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 54)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.041e-240At2g18550816370HB-2 (HOMEOBOX-2)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.026e-238At1g73180843652eukaryotic translation initiation factor-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MFOPBC.G.S.X.
0.012e-136At3g51740824337IMK2 (INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 2)encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.C.G.S.X.
0.039e-134At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMC.G.S.X.
0.029e-134At5g34850833406PAP26 (PURPLE ACID PHOSPHATASE 26)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:vacuole, plant-type cell wall;PBMOFAC.G.S.X.
0.029e-134At5g60360836158AALP (Arabidopsis aleurain-like protease)Encodes a senescence-associated thiol protease.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Glycine maxGma.6399.1.S1_atBI701478--9e-1At5g59030COPT1 (copper transporter 1)C.G.S.X.
0.054e-134Hordeum vulgareEBpi01_SQ002_J02_atEBpi01_SQ002_J02--4e-1At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)C.G.S.X.
0.051e-138Oryza sativaOsAffx.17073.1.S1_at---0C.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.220086.1.S1_atpmrna36400hypothetical protein-1e-3At3g29075glycine-rich proteinC.G.S.X.
0.049e-134Triticum aestivumTa.6965.1.S1_atBJ313225--3e+0At3g03847auxin-responsive family proteinC.G.S.X.
0.043e-134Vitis vinifera1619417_atCB002610--7e-1At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)C.G.S.X.
0.046e+030Zea maysZmAffx.258.1.A1_atAI670332hypothetical protein LOC100272955-8e-1At2g39540gibberellin-regulated family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009637A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
XGO:0009646A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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