Gene omics information

Query gene ID At5g52760
Gene name heavy-metal-associated domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At5g52760835353heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PS.X.H.G.
0.9095.1At5g66620836794DAR6 (DA1-RELATED PROTEIN 6)F:zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.8894.0At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOS.X.H.G.
0.8894.0At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.S.X.H.G.
0.8693.1At1g33760840267AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.S.X.H.G.
0.8693.1At2g22760816806basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMAS.X.H.G.
0.8693.1At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.8491.9At1g08860837408BON3 (BONZAI 3)Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.S.X.H.G.
0.8491.9At1g61460842440S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVAS.X.H.G.
0.8491.9At3g23220821900DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
459.3100.0E-MEXP-807-raw-cel-1173273144
349.8100.0E-MEXP-807-raw-cel-1173273252
295.5100.0E-MEXP-807-raw-cel-1173273088
291.5100.0E-MEXP-807-raw-cel-1173273060
270.6100.0E-MEXP-807-raw-cel-1173273223
253.0100.0E-MEXP-807-raw-cel-1173273196
244.2100.0E-MEXP-807-raw-cel-1173273116
177.6100.0E-MEXP-807-raw-cel-1173273170
49.799.8GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0
29.799.7GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.793e-68258At5g52750835352heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMC.G.S.X.
0.684e-33141At5g52770835354heavy-metal-associated protein-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.052e-136At5g52670835344heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.037e-134At4g26780828785AR192unknown functionC.G.S.X.
0.023e+032At5g18220831940glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOBC.G.S.X.
0.043e+032At5g52690835346heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.013e+032At4g39850830144PXA1 (PEROXISOMAL ABC TRANSPORTER 1)Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.C.G.S.X.
0.013e+032At4g29900829112ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxPsAffx.psZG007xB23f_s_atPsAffx.psZG007xB23f--3e+0At5g52760heavy-metal-associated domain-containing proteinC.G.S.X.
0.046e+030Hordeum vulgarebaak24a02_s_atbaak24a02--4e-9At4g38970fructose-bisphosphate aldolase, putativeC.G.S.X.
0.026e+032Oryza sativaOs09g04452009637.m02392--2e-4At3g49770unknown proteinC.G.S.X.
0.041e+034Populus trichocarpaPtp.2336.1.S1_atCK092100hypothetical protein-9e-1At5g52760heavy-metal-associated domain-containing proteinC.G.S.X.
0.033e+032Triticum aestivumTaAffx.81790.1.S1_atCA681842--4e+0At5g52760heavy-metal-associated domain-containing proteinC.G.S.X.
0.048e-132Vitis vinifera1621467_atCA817542hypothetical protein LOC100242259-3e-1At2g30420ETC2C.G.S.X.
0.035e+030Zea maysZm.321.1.S1_atCF006447basal layer antifungal peptide-3e-1At5g57370unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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