Gene omics information

Query gene ID At5g52710
Gene name heavy-metal-associated domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At5g52710835348heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.8994.6At5g52690835346heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PS.X.H.G.
0.7586.9At5g52680835345heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFVS.X.H.G.
0.6781.6At5g52670835344heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PS.X.H.G.
0.4050.8At3g27070822325TOM20-1 (translocase outer membrane 20-1)Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteinsS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
248.5100.0GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
219.4100.0GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
210.2100.0GSM184539Whole roots 2hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
184.3100.0GSM184545Whole roots 2hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
180.8100.0GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
157.899.9GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
147.999.9GSM184505Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
142.699.9GSM184538Whole roots 2hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
129.999.9GSM131342AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)
122.699.9GSM184509Pericycle root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.263e-31137At5g52690835346heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.142e-28127At5g52680835345heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFVC.G.S.X.
0.174e-27123At5g52700835347heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PMC.G.S.X.
0.073e-654At5g52670835344heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.022e-138At4g23570828457SGT1AClosely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.C.G.S.X.
0.012e-138At3g24630822059unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVC.G.S.X.
0.012e-138At1g56540842107disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.45276.1.S1_atBG239549--2e-1At2g04530CPZC.G.S.X.
0.025e+032Hordeum vulgareContig11710_atContig11710--2e-1At2g17850-C.G.S.X.
0.025e+034Oryza sativaOs02g05456009630.m03248--7e+0At4g22920NYE1 (NON-YELLOWING 1)C.G.S.X.
0.026e-240Populus trichocarpaPtpAffx.5629.1.A1_atCV241420--1e+0At5g53880unknown proteinC.G.S.X.
0.027e-136Triticum aestivumTa.13636.1.A1_atBQ171979--1e-1At5g52710heavy-metal-associated domain-containing proteinC.G.S.X.
0.023e+032Vitis vinifera1620649_atAY427191.1--5e-1At3g53550-C.G.S.X.
0.021e+034Zea maysZm.11631.1.A1_atBM379442brittle stalk2-1e+0At4g15460glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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