Gene omics information

Query gene ID At5g52690
Gene name heavy-metal-associated domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g52690835346heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PS.X.H.G.
0.8491.9At5g52710835348heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.7888.6At3g28510822481AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAVS.X.H.G.
0.7687.4At5g52680835345heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFVS.X.H.G.
0.7486.1At5g52670835344heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PS.X.H.G.
0.6781.6At1g59171842233ATP binding / inositol pentakisphosphate 2-kinaseF:inositol pentakisphosphate 2-kinase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6378.1At3g614008253122-oxoglutarate-dependent dioxygenase, putative1-aminocyclopropane-1-carboxylate oxidase-like proteinS.X.H.G.
0.5974.7At3g13090820497ATMRP8member of MRP subfamilyS.X.H.G.
0.4862.5At3g27070822325TOM20-1 (translocase outer membrane 20-1)Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteinsS.X.H.G.
0.4355.3At1g55120841955ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5)Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
445.9100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
228.5100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
222.4100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
217.9100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
205.5100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
168.4100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
165.6100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
160.299.9GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
152.599.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
138.799.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.701e-169595At5g52680835345heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFVC.G.S.X.
0.485e-83307At5g52700835347heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PMC.G.S.X.
0.269e-32137At5g52710835348heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVAC.G.S.X.
0.291e-1893At5g52670835344heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.177e-548At5g52720835349metal ion bindingF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PC.G.S.X.
0.047e-238At1g70360843372F-box protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-136At5g32450833204RNA recognition motif (RRM)-containing proteinF:oxidoreductase activity, nucleotide binding, nucleic acid binding;P:oxidation reduction;C:unknown;PFMOC.G.S.X.
0.011e+034At3g50010824163DC1 domain-containing proteinF:protein binding, zinc ion binding;P:unknown;C:cellular_component unknown;PMC.G.S.X.
0.021e+034At3g50140824176unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;MPOFVBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e+032Glycine maxGmaAffx.91247.1.S1_atCF806972--4e+0At5g43401-C.G.S.X.
0.048e+030Hordeum vulgareHU12N23u_s_atHU12N23u--5e-1At1g45145ATTRX5C.G.S.X.
0.038e+032Oryza sativaOs04g01551009632.m00627--1e+0At3g13130unknown proteinC.G.S.X.
0.031e+034Populus trichocarpaPtp.914.1.A1_atCV230451hypothetical protein-1e+0At5g52690heavy-metal-associated domain-containing proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.31410.1.S1_atCA616653--3e-1At4g33130-C.G.S.X.
0.031e+032Vitis vinifera1617966_atCF516835--4e+0At5g01610unknown proteinC.G.S.X.
0.032e+032Zea maysZm.3473.1.A1_atAY103936.1hypothetical protein LOC100279183-5e+0At5g22160unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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