Gene omics information

Query gene ID At5g52320
Gene name CYP96A4
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2726.2At5g52320835308CYP96A4member of CYP96AS.X.H.G.
0.4050.8At1g19670838554ATCLH1 (ARABIDOPSIS THALIANA CORONATINE-INDUCED PROTEIN 1)Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. Its expression is induced rapidly by methyljasmonate, a known promoter of senescence and chlorophyll degradation.S.X.H.G.
0.4050.8At3g25760822167AOC1 (ALLENE OXIDE CYCLASE 1)encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway.S.X.H.G.
0.4050.8At5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.S.X.H.G.
0.030.6At2g32290817789BAM6 (BETA-AMYLASE 6)F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:chloroplast;PBOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
87.299.9E-MEXP-449-raw-cel-676423253
75.699.9E-ATMX-19-raw-cel-1375547530
60.999.8GSM152139Col-0 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
59.499.8E-ATMX-19-raw-cel-1375547462
54.799.8E-ATMX-19-raw-cel-1375547496
54.299.8GSM152135Col-0 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
49.699.8E-ATMX-19-raw-cel-1375547479
42.899.8E-MEXP-449-raw-cel-676423218
41.399.8GSM152137Col-0 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
37.699.7GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8501211At1g65340842842CYP96A3member of CYP96AC.G.S.X.
0.153e-22107At2g21910816727CYP96A5member of CYP96AC.G.S.X.
0.362e-1791At1g57750842150CYP96A15 (CYTOCHROME P450 96 A1)Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.C.G.S.X.
0.252e-1377At2g23180816850CYP96A1member of CYP96AC.G.S.X.
0.223e-963At4g39480830103CYP96A9 (CYTOCHROME P450 96 A9)member of CYP96AC.G.S.X.
0.112e-757At4g39500830104CYP96A11member of CYP96AC.G.S.X.
0.068e-756At4g394903770599CYP96A10member of CYP96AC.G.S.X.
0.113e-654At5g02900831752CYP96A13member of CYP96AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+034Glycine maxGmaAffx.82633.1.S1_atBM178737--3e-3At3g48520CYP94B3C.G.S.X.
0.021e+034Hordeum vulgareHU11J18u_x_atHU11J18u--4e+0At2g04020GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.026e+034Oryza sativaOs02g0556800AK100187.1-Conserved hypothetical protein3e-2At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.052e-552Populus trichocarpaPtpAffx.207156.1.S1_atpmrna14196cytochrome P450-1e-5At2g23180CYP96A1C.G.S.X.
0.023e+034Triticum aestivumTa.12236.1.A1_atBQ171916--2e-1At2g04925-C.G.S.X.
0.024e+032Vitis vinifera1616732_atCB971918--2e-1At3g62550universal stress protein (USP) family proteinC.G.S.X.
0.011e+034Zea maysZm.5895.1.A1_atBM073861hypothetical protein LOC100193058-8e-7At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00903Link to KEGG PATHWAYLimonene and pinene degradation
00945Link to KEGG PATHWAYStilbenoid, diarylheptanoid and gingerol biosynthesis
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