Gene omics information

Query gene ID At5g52260
Gene name AtMYB19 (myb domain protein 19)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g52260835302AtMYB19 (myb domain protein 19)Member of the R2R3 factor gene family.S.X.H.G.
0.4862.5At2g24130816947leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.4558.3At2g17590816266DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PFMS.X.H.G.
0.4457.2At5g02210831804-F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;POS.X.H.G.
0.4050.8At5g53740835455unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.3846.7At4g19320827673transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.3846.7At2g01790814710meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:unknown;P:N-terminal protein myristoylation;C:endomembrane system;PMOFS.X.H.G.
0.3745.0At5g35830833569ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOBPFVAS.X.H.G.
0.3541.6At5g34450833359transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.3439.8At4g04730825808unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
694.4100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
520.9100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
490.5100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
478.3100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
94.099.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
91.899.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
91.799.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
78.099.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
77.099.9GSM184511Pericycle root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
76.899.9GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.455e-90331At4g25560828661AtMYB18 (myb domain protein 18)Member of the R2R3 factor gene family.C.G.S.X.
0.031e-1377At5g55020835593MYB120 (MYB DOMAIN PROTEIN 120)Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB120).C.G.S.X.
0.173e-1169At3g48920824053AtMYB45 (myb domain protein 45)Member of the R2R3 factor gene family.C.G.S.X.
0.041e-1067At1g63910842694AtMYB103 (myb domain protein 103)member of MYB3R- and R2R3- type MYB- encoding genesC.G.S.X.
0.104e-1065At3g24310822019MYB305 (myb domain protein 305)snapdragon myb protein 305 homolog (myb)C.G.S.X.
0.042e-963At3g06490819827MYB108 (myb domain protein 108)putative transcription factor MYB108 (MYB108) mRNA,C.G.S.X.
0.047e-961At4g38620830018MYB4Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.C.G.S.X.
0.113e-859At4g13480826980AtMYB79 (myb domain protein 79)Member of the R2R3 factor gene family.C.G.S.X.
0.051e-757At1g48000841218MYB112 (myb domain protein 112)Encodes a putative transcription factor (MYB112).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.253e-1273Glycine maxGmaAffx.62509.2.S1_atBE021475MYB transcription factor MYB94-9e-13At5g52260AtMYB19 (myb domain protein 19)C.G.S.X.
0.033e+032Hordeum vulgareContig21039_atContig21039--1e+0At1g61688-C.G.S.X.
0.048e-446Oryza sativaOs08g0548000AK069869.1-Myb, DNA-binding domain containing protein1e-13At1g22640MYB3 (MYB DOMAIN PROTEIN 3)C.G.S.X.
0.343e-21103Populus trichocarpaPtpAffx.210742.1.S1_x_atpmrna21073hypothetical protein-8e-22At5g52260AtMYB19 (myb domain protein 19)C.G.S.X.
0.032e-344Triticum aestivumTaAffx.85627.1.S1_atCA621042--8e-11At5g10280ATMYB92 (MYB DOMAIN PROTEIN 92)C.G.S.X.
0.073e-238Vitis vinifera1619454_atCF568815--1e-55At4g38620MYB4C.G.S.X.
0.057e-134Zea maysZm.13877.1.S1_x_atAF099426.1R2R3MYB-domain protein-2e-1At5g52260AtMYB19 (myb domain protein 19)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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