Gene omics information

Query gene ID At5g52160
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g52160835292protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
1.00100.0At1g01280839470CYP703A2 (CYTOCHROME P450, FAMILY 703, SUBFAMILY A, POLYPEPTIDE 2)member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).S.X.H.G.
0.9897.8At2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.9897.8At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.9697.3At3g42960823352ATA1 (ARABIDOPSIS TAPETUM 1)Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.S.X.H.G.
0.9697.3At4g20420827790tapetum-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9697.3At4g29980829121unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9496.7At3g07450819933protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.9496.7At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFS.X.H.G.
0.9496.7At4g35420829695dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAVS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
581.3100.0E-MEXP-1592-raw-cel-1617526952
503.1100.0E-MEXP-1592-raw-cel-1617526888
489.7100.0E-MEXP-1592-raw-cel-1617526984
471.9100.0E-MEXP-1592-raw-cel-1617526856
464.8100.0E-MEXP-1592-raw-cel-1617526848
447.7100.0E-MEXP-1592-raw-cel-1617526920
410.3100.0E-MEXP-1592-raw-cel-1617526824
353.2100.0E-MEXP-1592-raw-cel-1617526976
340.9100.0E-MEXP-1592-raw-cel-1617526816
312.3100.0E-MEXP-1592-raw-cel-1617526944
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-136At1g55120841955ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5)Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.C.G.S.X.
0.015e-134At5g11940831067subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.032e+032At5g25530832628DNAJ heat shock protein, putativeF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVC.G.S.X.
0.042e+032At4g29020829023glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-136Glycine maxGmaAffx.33994.1.A1_atCD398409--2e-1At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.062e-238Hordeum vulgareHVSMEb0006N17f_atHVSMEb0006N17f--5e-2At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.031e+034Oryza sativaOsAffx.30725.3.S1_at---0C.G.S.X.
0.052e-136Populus trichocarpaPtpAffx.201879.1.S1_atpmrna3744hypothetical protein-7e-8At5g46780VQ motif-containing proteinC.G.S.X.
0.056e-444Triticum aestivumTa.11165.1.A1_atBQ169540--1e-3At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.071e-238Vitis vinifera1608571_s_atCF415059hypothetical protein LOC100243125 /// hypothetical protein LOC100256803-6e-2At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.052e-134Zea maysZmAffx.45.1.A1_atAI664925amino acid permease-8e-1At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage