Gene omics information

Query gene ID At5g51950
Gene name glucose-methanol-choline (GMC) oxidoreductase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g51950835270glucose-methanol-choline (GMC) oxidoreductase family proteinF:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:response to salt stress;C:endomembrane system;OBFMPVAS.X.H.G.
0.9296.0At5g49180834977pectinesterase family proteinEncodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.S.X.H.G.
0.9296.0At1g61720842469BAN (BANYULS)Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.S.X.H.G.
0.8994.6At1g56100842062pectinesterase inhibitor domain-containing proteinF:enzyme inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;OMFPBAVS.X.H.G.
0.8592.4At3g20210821565DELTA-VPEEncodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.S.X.H.G.
0.8491.9At4g12890826901gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOFS.X.H.G.
0.7989.1At1g24540839069CYP86C1member of CYP86CS.X.H.G.
0.7788.0At5g13670831212nodulin MtN21 family proteinF:unknown;P:unknown;C:endomembrane system, membrane;BOPAMS.X.H.G.
0.7687.4At1g10540837595xanthine/uracil permease family proteinF:transmembrane transporter activity;P:transport;C:membrane;BOMPFAVS.X.H.G.
0.7687.4At4g26590828766OPT5 (OLIGOPEPTIDE TRANSPORTER 5)oligopeptide transporterS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
568.6100.0GSM10480lec1-1 Cotyledon Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
402.2100.0GSM10479lec1-1 Cotyledon Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
356.3100.0GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
307.8100.0GSM10448WT Cotyledon Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
299.5100.0GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
267.1100.0GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
256.8100.0GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
228.0100.0GSM10449WT Cotyledon Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
145.399.9GSM311284Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
119.599.9GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.572e-81303At3g56060824772glucose-methanol-choline (GMC) oxidoreductase family proteinF:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVAC.G.S.X.
0.501e-58228At5g51930835268glucose-methanol-choline (GMC) oxidoreductase family proteinF:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, oxidoreductase activity, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVAC.G.S.X.
0.094e-654At1g12570837814glucose-methanol-choline (GMC) oxidoreductase family proteinF:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVAC.G.S.X.
0.066e-550At1g73050843636(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putativeF:oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cyanide biosynthetic process, defense response;C:endomembrane system;OBFMPVAC.G.S.X.
0.011e-242At1g24570839071unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBOC.G.S.X.
0.019e-136At3g01310821297acid phosphatase/ oxidoreductase/ transition metal ion bindingF:oxidoreductase activity, transition metal ion binding, acid phosphatase activity;P:biological_process unknown;C:plasma membrane;MFOPBC.G.S.X.
0.019e-136At3g62300825403agenet domain-containing proteinF:RNA binding;P:unknown;C:cellular_component unknown;PMOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.083e-757Glycine maxGma.16969.1.S1_s_atBI968170--7e-8At5g51950glucose-methanol-choline (GMC) oxidoreductase family proteinC.G.S.X.
0.023e-240Hordeum vulgareHB19I03r_atHB19I03r--2e-1At3g16190isochorismatase hydrolase family proteinC.G.S.X.
0.051e-450Oryza sativaOs10g0524500AF251031.1-Mandelonitrile lyase-like protein7e-5At5g51950glucose-methanol-choline (GMC) oxidoreductase family proteinC.G.S.X.
0.098e-550Populus trichocarpaPtpAffx.200461.1.S1_atpmrna926hypothetical protein-2e-8At5g51930glucose-methanol-choline (GMC) oxidoreductase family proteinC.G.S.X.
0.022e-138Triticum aestivumTa.3259.1.S1_x_atCF133886--9e-2At5g51950glucose-methanol-choline (GMC) oxidoreductase family proteinC.G.S.X.
0.047e-857Vitis vinifera1622345_atCB970837hypothetical protein LOC100266705-3e-14At1g73050(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putativeC.G.S.X.
0.071e-138Zea maysZm.1657.1.A1_atBG842419hypothetical protein LOC100192014-7e-2At5g51950glucose-methanol-choline (GMC) oxidoreductase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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