CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g51770

Gene name protein kinase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.15 7.8 At5g51770 835251 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;PMOFBVA S.X. H.G.
0.50 65.3 At1g53860 841823 remorin family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMOFBA S.X. H.G.
0.50 65.3 At4g17350 827447 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFO S.X. H.G.
0.46 59.8 At1g10330 837572 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF S.X. H.G.
0.40 50.8 At1g58050 842172 helicase domain-containing protein F:helicase activity, ATP binding, nucleic acid binding;P:biological_process unknown;C:chloroplast;BMOFPVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
490.7 100.0 GSM133760 Lindsey_1-12_heart-stage-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
301.9 100.0 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
138.7 99.9 GSM133756 Lindsey_1-10_heart-stage-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
136.3 99.9 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
129.1 99.9 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
102.7 99.9 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
68.2 99.9 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
57.5 99.8 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
52.3 99.8 GSM133755 Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
41.3 99.8 GSM133767 Lindsey_1-19_torpedo-basal_Rep4_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.39 2e-32 141 At4g25390 828642 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.03 2e-5 52 At1g80870 844427 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.01 3e-4 48 At5g39020 833894 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.01 3e-4 48 At1g53430 841778 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.01 1e-3 46 At1g53440 841779 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.02 4e-3 44 At4g23320 828431 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-2 40 Glycine max Gma.13369.1.S1_at CD409367 - - 2e-12 At1g67520 lectin protein kinase family protein C.G. S.X.
0.01 3e-2 40 Hordeum vulgare Contig11724_at Contig11724 - - 8e-11 At5g13160 PBS1 (avrPphB susceptible 1) C.G. S.X.
0.02 3e-2 42 Oryza sativa Os07g0599100 9635.m04080 - Disease resistance protein family protein 3e+0 At5g59590 UGT76E2 (UDP-GLUCOSYL TRANSFERASE 76E2) C.G. S.X.
0.10 6e-6 54 Populus trichocarpa PtpAffx.213041.1.S1_at pmrna25522 hypothetical protein - 4e-6 At4g25390 protein kinase family protein C.G. S.X.
0.03 1e+0 36 Triticum aestivum TaAffx.118361.1.S1_at BF292814 - - 3e-2 At4g25390 protein kinase family protein C.G. S.X.
0.03 8e-11 67 Vitis vinifera 1608454_at CF405827 hypothetical protein LOC100260029 - 7e-3 At1g21245 wall-associated kinase-related C.G. S.X.
0.02 4e-4 46 Zea mays Zm.15777.1.A1_at CD446878 - - 6e-19 At5g49470 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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