Gene omics information

Query gene ID At5g51600
Gene name PLE (PLEIADE)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7184.2At5g51600835234PLE (PLEIADE)Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.S.X.H.G.
0.8089.8At3g23890821972TOPII (TOPOISOMERASE II)Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.S.X.H.G.
0.8089.8At3g51280824291male sterility MS5, putativeF:binding;P:unknown;C:cellular_component unknown;OBPAFS.X.H.G.
0.7788.0At3g20150821558kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOFPBAVS.X.H.G.
0.7788.0At4g23800828480high mobility group (HMG1/2) family proteinF:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAVS.X.H.G.
0.7385.5At1g03780839140targeting protein-relatedHomolog of vertebrate TPX2. Protein has three domains involved in nuclear targeting, one in nuclear export and two in microtubule binding. Involved in mitotic spindle assembly during late prophase and early prometaphase.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
82.199.9GSM284384Arabidopsis GEP5GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
75.299.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
68.799.9GSM284385Arabidopsis GEP6GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
63.799.8GSM311287Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
63.299.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.115e-963At5g62250836346MAP65-9 (MICROTUBULE-ASSOCIATED PROTEIN 65-9)F:unknown;P:biological_process unknown;C:microtubule;MOBFPAVC.G.S.X.
0.091e-656At3g60840825255MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)F:unknown;P:anaphase;C:nucleus, vacuole, preprophase band, spindle, phragmoplast;MOBFPAVC.G.S.X.
0.012e-242At5g64440836565AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase)AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.C.G.S.X.
0.017e-240At5g66450836777phosphatidic acid phosphatase-related / PAP2-relatedF:catalytic activity;P:biological_process unknown;C:membrane;MFPOBC.G.S.X.
0.017e-240At5g54280835516ATM2 (ARABIDOPSIS THALIANA MYOSIN 2)Type VII myosin geneC.G.S.X.
0.027e-240At1g14690838034MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBAVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-757Glycine maxGmaAffx.84296.2.S1_atBE346563--4e-53At4g26760MAP65-2C.G.S.X.
0.011e-138Hordeum vulgareEBro02_SQ006_N05_atEBro02_SQ006_N05--8e-1At5g44495-C.G.S.X.
0.076e-448Oryza sativaOs01g0686000AK110784.1-Conserved hypothetical protein6e+0At5g52390photoassimilate-responsive protein, putativeC.G.S.X.
0.305e-22107Populus trichocarpaPtpAffx.210791.1.S1_x_atpmrna21171hypothetical protein-3e-22At5g51600PLE (PLEIADE)C.G.S.X.
0.043e-448Triticum aestivumTa.5793.1.A1_a_atCD895981--4e-11At5g55230ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)C.G.S.X.
0.161e-31137Vitis vinifera1606909_atCF608589hypothetical protein LOC100244670-9e-32At5g51600PLE (PLEIADE)C.G.S.X.
0.051e-138Zea maysZm.4729.1.A1_atAI738324--9e-17At5g55230ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046785The addition of tubulin heterodimers to one or both ends of a microtubule.
XGO:0000226A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
XGO:0000280A process by which a cell nucleus is divided into two nuclei, with DNA and other nuclear contents distributed between the daughter nuclei.
XGO:0000911The process of dividing the cytoplasm of a parent cell where a structure forms in the cytoplasm and grows until reaching the plasma membrane, thereby completely separating the cytoplasms of adjacent progeny cells. An example of this is found in Arabidopsis thaliana.
XGO:0009624A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.
XGO:0052096The assembly by an organism of a syncytium, a nematode-induced multi-nucleate and physiologically active aggregation of fused root cells which exclusively provides the nematode with nourishment during its sedentary life, for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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