Gene omics information

Query gene ID At5g51020
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3541.6At5g51020835175CRL (CRUMPLED LEAF)Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division.S.X.H.G.
0.5065.3At5g44000834423glutathione S-transferase C-terminal domain-containing proteinF:glutathione transferase activity;P:unknown;C:chloroplast;BOFPMAS.X.H.G.
0.4355.3At5g49970835061ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE)encodes the bifunctional pyridoxine (pyridoxamine) 5-phosphate oxidase (PPOX)(EC that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group)S.X.H.G.
0.1811.4At5g50920835165CLPC1Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.S.X.H.G.
0.1811.4At2g03390814868uvrB/uvrC motif-containing proteinF:DNA binding, nuclease activity;P:nucleotide-excision repair;C:chloroplast;OBMFPS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.099.2GSM133769Lindsey_1-21_torpedo-basal_Rep6_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
10.399.2GSM245924csn4-1_mutant_dark replicate 3GSE9728COP9 signalosome (csn) mutant analysis
9.799.1GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysis
6.398.6GSM245922csn4-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysis
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At1g54490841891XRN4 (EXORIBONUCLEASE 4)Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing.C.G.S.X.
0.022e+034At5g38290833811peptidyl-tRNA hydrolase family proteinF:aminoacyl-tRNA hydrolase activity;P:translation;C:chloroplast;BOPFMC.G.S.X.
0.012e+034At5g59700836091protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.012e+034At4g15370827203BARS1 (BARUOL SYNTHASE 1)Encodes an oxidosqualene cyclase that primarily produces the tetracyclic triterpene baruol in vitro and when expressed in yeast. It can also make 22 other minor triterpenoid products with varying numbers of rings.C.G.S.X.
0.012e+034At4g38640830020choline transporter-relatedF:unknown;P:unknown;C:unknown;MOFPABC.G.S.X.
0.012e+034At1g50360841458VIIIAmember of Myosin-like proteinsC.G.S.X.
0.012e+034At1g58230842191WD-40 repeat family protein / beige-relatedF:unknown;P:signal transduction;C:mitochondrion;MBOFPAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.354e-45182Glycine maxGma.12036.1.S1_atCD405874--4e-45At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
0.191e-1479Hordeum vulgareContig19983_atContig19983--4e-14At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
0.174e-1583Oryza sativaOs11g0524300AK106093.1-Protein of unknown function DUF1001 family protein3e-15At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
0.402e-62240Populus trichocarpaPtpAffx.38716.1.S1_atDN491215hypothetical protein-2e-62At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
0.122e-1273Triticum aestivumTa.8189.1.S1_atBQ161562--3e-12At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
0.221e-1065Vitis vinifera1619087_s_atBQ796971hypothetical protein LOC100264699-3e-10At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
0.063e+032Zea maysZmAffx.432.1.A1_atAI676917--3e+0At5g51020CRL (CRUMPLED LEAF)C.G.S.X.
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Biological processes

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ECCGO IDProcess Name
XGO:0043572The creation of two or more plastids by division of one plastid. A plastid is any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA.
XGO:0051302Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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