Gene omics information

Query gene ID At5g50600
Gene name AtHSD1 (hydroxysteroid dehydrogenase 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1912.7At5g50600835129AtHSD1 (hydroxysteroid dehydrogenase 1)F:oxidoreductase activity, binding, catalytic activity;P:response to brassinosteroid stimulus, response to abscisic acid stimulus;C:endomembrane system;BOMFPAVS.X.H.G.
0.7586.9At4g271408288222S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMOS.X.H.G.
0.7586.9At4g271508288232S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.7586.9At4g27160828824AT2S3F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.6781.6At1g03880839383CRU2 (CRUCIFERIN 2)Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
308.6100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
261.4100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
258.5100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
245.3100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
237.4100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
234.2100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
210.7100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
210.5100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
202.9100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
174.0100.0E-MEXP-849-raw-cel-1181980982
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
1.0002082At5g50700835141short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVC.G.S.X.
0.079e-652At3g47350823889short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVC.G.S.X.
0.031e-138At3g47360823890AtHSD3 (hydroxysteroid dehydrogenase 3)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVC.G.S.X.
0.021e-138At2g17040816209anac036 (Arabidopsis NAC domain containing protein 36)F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;PC.G.S.X.
0.015e-136At5g25520832627transcription elongation factor-relatedF:unknown;P:transcription;C:unknown;MOFBPVC.G.S.X.
0.015e-136At5g40820834082ATRAD3Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.C.G.S.X.
0.015e-136At4g30991-C.G.S.X.
0.025e-136At3g26700822282protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.075e-240Glycine maxGma.871.1.S1_atBE658253--2e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.062e-550Hordeum vulgareContig4786_atContig4786--4e-5At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)C.G.S.X.
0.042e-242Oryza sativaOs04g0390700AK107261.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.113e-344Populus trichocarpaPtpAffx.155.2.S1_a_atDN501660hypothetical protein-2e-3At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.069e-652Triticum aestivumTa.5721.1.S1_atCD911583--3e-3At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)C.G.S.X.
0.032e-446Vitis vinifera1614670_atBQ796652hypothetical protein LOC100245367-7e-7At3g47360AtHSD3 (hydroxysteroid dehydrogenase 3)C.G.S.X.
0.024e+032Zea maysZm.9264.1.A1_atBM267689--2e+0At5g13190-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
XGO:0009741A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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