Gene omics information

Query gene ID At5g50360
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At5g50360835103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.8693.1At1g52690841701late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PBMOFVAS.X.H.G.
0.7385.5At2g47770819389benzodiazepine receptor-relatedF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BMOPAFS.X.H.G.
0.5773.8At5g06760830565late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy, embryonic development;C:cellular_component unknown;PMBOFVS.X.H.G.
0.5773.8At5g66400836772RAB18 (RESPONSIVE TO ABA 18)Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
295.0100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
291.2100.0GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
234.1100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
220.7100.0GSM131299AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
188.1100.0GSM131300AtGen_6-2512_Osmoticstress-Shoots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
167.5100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
158.199.9GSM311296Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
151.099.9GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
147.299.9GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
119.899.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.141e-1997At5g63350836455unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.095e-1995At3g48510824010unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.061e-448At5g40800834080unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-240At5g40790834079unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.023e-240At3g27250822344unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.014e-136At3g10690820238DNA gyrase subunit A family proteinF:DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding;P:DNA topological change, DNA metabolic process;C:mitochondrion, chloroplast, nucleoid;OBMFVPAC.G.S.X.
0.024e-136At2g18500816365OFP7 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7)F:unknown;P:biological_process unknown;C:plasma membrane;PFOC.G.S.X.
0.044e-136At1g485986241053CPuORF31 (Conserved peptide upstream open reading frame 31)Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF31 represents a conserved upstream opening reading frame relative to major ORF AT1G48600.1C.G.S.X.
0.014e-136At1g49890841412unknown proteinF:unknown;P:unknown;C:chloroplast;OMFBPVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.10204.1.S1_atBQ298213--9e-6At5g63350unknown proteinC.G.S.X.
0.023e+032Hordeum vulgareHM04D17r_atHM04D17r--1e+0At4g05553zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.033e+034Oryza sativaOs06g01568009634.m00554--2e+0At5g55570unknown proteinC.G.S.X.
0.074e-859Populus trichocarpaPtpAffx.201020.1.S1_atpmrna1999hypothetical protein-3e-2At3g27250unknown proteinC.G.S.X.
0.042e-344Triticum aestivumTaAffx.28760.1.S1_atCA656452--1e-3At5g50360unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1622084_atCF513595hypothetical protein LOC100256435-1e+0At5g51451unknown proteinC.G.S.X.
0.021e+130Zea maysZmAffx.963.1.A1_atAI833792--8e-1At4g04620ATG8B (autophagy 8b)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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