Gene omics information

Query gene ID At5g49900
Gene name catalytic/ glucosylceramidase
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g49900835053catalytic/ glucosylceramidaseF:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:integral to membrane, membrane;BPMOAS.X.H.G.
0.9998.1At5g67080836843MAPKKK19member of MEKK subfamilyS.X.H.G.
0.9897.8At1g64610842769WD-40 repeat family proteinF:signal transducer activity;P:signal transduction;C:heterotrimeric G-protein complex;MFBOPAS.X.H.G.
0.9897.8At5g58190835931ECT10F:unknown;P:unknown;C:unknown;MPFOS.X.H.G.
0.9797.6At1g23210838930AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFS.X.H.G.
0.9797.6At1g77410844078BGAL16 (beta-galactosidase 16)F:cation binding, sugar binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;MBPFOAS.X.H.G.
0.9797.6At2g44190819026EDE1 (ENDOSPERM DEFECTIVE 1)Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo.S.X.H.G.
0.9697.3At1g77250844061PHD finger family proteinF:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:unknown;MPFOS.X.H.G.
0.9697.3At4g08590826420ORTHL (ORTHRUS-LIKE)F:ubiquitin-protein ligase activity, zinc ion binding;P:protein ubiquitination;C:cytoplasm;MPOFBVS.X.H.G.
0.9697.3At1g08600837382ATRXF:helicase activity, DNA binding, nucleic acid binding, ATP binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1302.9100.0E-ATMX-35-raw-cel-1574334800
1109.9100.0E-ATMX-35-raw-cel-1574334816
889.4100.0E-ATMX-35-raw-cel-1574334832
45.199.8E-ATMX-35-raw-cel-1574334880
39.299.8GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
34.799.7GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
29.699.7E-ATMX-35-raw-cel-1574334848
21.299.6GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
19.499.6GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
17.299.5GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.104e-1687At1g33700840261catalytic/ glucosylceramidaseF:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:vacuole;BPMOAC.G.S.X.
0.126e-963At4g10060826597catalytic/ glucosylceramidaseF:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:vacuole;BMPOAC.G.S.X.
0.061e-450At3g24180822004catalytic/ glucosylceramidaseF:glucosylceramidase activity, catalytic activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:plasma membrane;BMPOAFC.G.S.X.
0.019e-240At5g18040831925unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;PC.G.S.X.
0.019e-240At3g60020825172ASK5 (ARABIDOPSIS SKP1-LIKE 5)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:nucleus;MPOFVC.G.S.X.
0.014e-138At4g08790826449nitrilase, putativeF:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrilase activity;P:response to cadmium ion, nitrogen compound metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.011e+036At5g45160834552root hair defective 3 GTP-binding (RHD3) family proteinF:GTP binding;P:unknown;C:endoplasmic reticulum;OFPMBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.191e-32143Glycine maxGmaAffx.19904.1.S1_atBU761513--1e-33At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.012e-138Hordeum vulgareContig9442_atContig9442--2e+0At1g76190auxin-responsive family proteinC.G.S.X.
0.131e-1173Oryza sativaOs11g0242100AK069387.1-Protein of unknown function DUF608 domaincontaining protein8e-12At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.318e-34147Populus trichocarpaPtpAffx.216718.1.S1_x_atpmrna31678hypothetical protein-5e-34At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.073e-1481Triticum aestivumTa.20469.1.S1_atCA642463--1e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
0.077e-342Vitis vinifera1618000_atCD721411--2e-55At3g24180catalytic/ glucosylceramidaseC.G.S.X.
0.145e-1479Zea maysZm.18304.1.S1_atCO522721--6e-14At5g49900catalytic/ glucosylceramidaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006665The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).
LGO:0006680The chemical reactions and pathways resulting in the breakdown of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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