Gene omics information

Query gene ID At5g49350
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1710.2At5g493503771473unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAS.X.H.G.
0.5065.3At1g68850843218peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.5065.3At4g36610829813hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFAS.X.H.G.
0.4659.8At5g13580831202ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPVS.X.H.G.
0.3133.8At5g09530830812hydroxyproline-rich glycoprotein family proteinF:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
265.8100.0GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
193.1100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
141.799.9GSM75518slr-1 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
109.499.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
96.899.9GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
95.099.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
94.299.9GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
82.599.9GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
80.299.9GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
76.099.9GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.027e-342At2g41170818716F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POC.G.S.X.
0.024e-136At1g70190843355ribosomal protein L12 family proteinF:structural constituent of ribosome;P:translation;C:mitochondrion, large ribosomal subunit;BOPMFC.G.S.X.
0.014e-136At1g31810840068actin bindingF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MFBOPVAC.G.S.X.
0.012e+034At5g61040836225unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.022e+034At5g67520836888adenylylsulfate kinase, putativeF:kinase activity, transferase activity, transferring phosphorus-containing groups, ATP binding;P:sulfate assimilation;C:chloroplast;BOMFPAVC.G.S.X.
0.032e+034At4g296583770557PRA1.C (PRENYLATED RAB ACCEPTOR 1.C)F:unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;POC.G.S.X.
0.012e+034At4g23300828429protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.022e+034At3g47180823871zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-136Glycine maxGmaAffx.10118.1.S1_atBQ081339--2e-1At5g67490unknown proteinC.G.S.X.
0.032e-136Hordeum vulgareHY03K23u_atHY03K23u--1e-12At3g46230ATHSP17.4C.G.S.X.
0.046e-240Oryza sativaOs03g0275900AK121978.1-U box domain containing protein6e-3At3g46510PUB13 (PLANT U-BOX 13)C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.50640.1.A1_atCV238485--1e+1At4g16140proline-rich family proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.131043.1.S1_atBE424737--2e+1At5g18270ANAC087C.G.S.X.
0.062e+032Vitis vinifera1617526_s_atCB972978hypothetical protein LOC100250396-8e-1At2g10920unknown proteinC.G.S.X.
0.023e+032Zea maysZmAffx.1145.1.A1_atAW400072--1e-2At1g67570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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