Gene omics information

Query gene ID At5g49100
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2319.3At5g49100834969unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFPVS.X.H.G.
0.6781.6At3g26640822276LWD2 (LIGHT-REGULATED WD 2)F:nucleotide binding;P:photoperiodism, flowering, entrainment of circadian clock by photoperiod;C:cellular_component unknown;MFPOBAS.X.H.G.
0.5773.8At5g03345831867-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOS.X.H.G.
0.4050.8At3g13070820495CBS domain-containing protein / transporter associated domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMPFAS.X.H.G.
0.3846.7At3g57360824903unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
237.4100.0GSM133775Lindsey_1-27_torpedo-meristem_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
65.599.8GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
42.999.8GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
41.999.8GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
39.499.8GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.999.7GSM184528Stele root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.799.7GSM184522Stele root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
28.599.7GSM133779Lindsey_1-5_globular-basal_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
27.599.7GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
25.399.6GSM133767Lindsey_1-19_torpedo-basal_Rep4_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.346e-41169At3g068686241205unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVC.G.S.X.
0.136e-41169At3g06870819871proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFVBC.G.S.X.
0.032e-344At5g03550831790-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e-344At1g64080842712unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPVC.G.S.X.
0.011e-242At2g33580817923protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinF:kinase activity;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:plasma membrane;MPOBFVAC.G.S.X.
0.011e-242At1g28530839753unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
0.031e-242At1g02660839544lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;MOFPBVC.G.S.X.
0.021e-242At1g78180844154bindingF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOC.G.S.X.
0.021e-242At1g64150842719unknown proteinF:unknown;P:unknown;C:chloroplast, membrane;BOMFPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.094e-1893Glycine maxGmaAffx.58662.1.S1_atAW755793--2e-17At3g06870proline-rich family proteinC.G.S.X.
0.033e-136Hordeum vulgareContig3787_atContig3787--6e+0At3g32160unknown proteinC.G.S.X.
0.033e-138Oryza sativaOs11g02949019639.m01762--6e-1At5g22680-C.G.S.X.
0.184e-24113Populus trichocarpaPtpAffx.224622.1.S1_atpmrna43332hypothetical protein-3e-24At5g49100unknown proteinC.G.S.X.
0.052e-138Triticum aestivumTa.12764.1.A1_atBQ161775--2e+0At3g53402CPuORF46 (Conserved peptide upstream open reading frame 46)C.G.S.X.
0.042e-136Vitis vinifera1622507_atCB975105--6e-20At1g51410cinnamyl-alcohol dehydrogenase, putative (CAD)C.G.S.X.
0.047e-238Zea maysZm.8561.2.A1_a_atBM332166hypothetical protein LOC100277438-4e+0At4g05070unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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