Gene omics information

Query gene ID At5g48850
Gene name ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8491.9At5g48850834943ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.S.X.H.G.
0.7586.9At4g28703828989-F:molecular_function unknown;P:unknown;C:cellular_component unknown;BOPS.X.H.G.
0.7486.1At2g22760816806basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMAS.X.H.G.
0.7385.5At5g66620836794DAR6 (DA1-RELATED PROTEIN 6)F:zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.7385.5At2g27320817275unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBS.X.H.G.
0.7284.8At1g61460842440S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVAS.X.H.G.
0.7284.8At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.S.X.H.G.
0.7284.8At5g67450836881AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor.S.X.H.G.
0.7184.2At5g52050835280MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;BOPFAMS.X.H.G.
0.7184.2At5g51190835193AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
300.6100.0GSM269815T6 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
254.4100.0GSM269833T8 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
191.5100.0E-MEXP-807-raw-cel-1173273252
134.299.9GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
114.499.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
109.599.9E-MEXP-807-raw-cel-1173273170
108.899.9E-ATMX-1-raw-cel-1112746154
103.999.9GSM133866Cain_1-1_WT1_Rep1_ATH1GSE5740Polycomb Binding Protein
103.499.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
90.799.9GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.072e-1583At1g04770839418male sterility MS5 family proteinF:binding;P:biological_process unknown;C:unknown;POBC.G.S.X.
0.035e-756At5g44330834458male sterility MS5 family proteinF:binding;P:biological_process unknown;C:unknown;POBAC.G.S.X.
0.112e-654At3g51280824291male sterility MS5, putativeF:binding;P:unknown;C:cellular_component unknown;OBPAFC.G.S.X.
0.043e-550At5g60590836180yrdC protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOAMFPC.G.S.X.
0.083e-550At4g20900827838MS5 (MALE-STERILE 5)ms5 mutants are male sterile, pollen tetrads undergo an extra round of division after meiosis II without chromosome replication, resulting in chromosome abnormalities. Gene product has some similarity to SCP1, a rat synaptonemal complex protein.C.G.S.X.
0.017e-342At5g45460834582unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.023e-240At5g28900833013calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:nucleus, cytoplasm;MOPFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.251e-552Glycine maxGma.13901.1.S1_atBE330180--7e-6At5g48850ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)C.G.S.X.
0.071e-344Hordeum vulgareContig18424_atContig18424--2e-3At5g48850ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)C.G.S.X.
0.066e-240Oryza sativaOs05g0506000AK122090.1-MS5-like protein (Fragment)4e-2At5g48850ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)C.G.S.X.
0.322e-1377Populus trichocarpaPtpAffx.202651.1.S1_atpmrna5298hypothetical protein-1e-13At5g48850ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)C.G.S.X.
0.075e-446Triticum aestivumTaAffx.19033.1.S1_atBJ266337--6e-4At5g48850ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)C.G.S.X.
0.124e-857Vitis vinifera1617222_atCD013418hypothetical protein LOC100244941-1e-11At1g04770male sterility MS5 family proteinC.G.S.X.
0.023e+032Zea maysZm.3646.2.S1_a_atCO527617hypothetical protein LOC100272696-1e-7At4g26780AR192C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006792Any process that modulates the frequency, rate or extent of sulfur utilization.
XGO:0010438A change in the state or activity of a cell (in terms of enzyme production, gene expression, etc.) as a result of deprivation of sulfur.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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