Gene omics information

Query gene ID At5g48530
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2726.2At5g48530834909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PS.X.H.G.
0.1811.4At5g61560836277protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVAS.X.H.G.
0.103.4At1g61360842430S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.071.9At4g23190828418CRK11 (CYSTEINE-RICH RLK11)Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)S.X.H.G.
0.061.4At5g25930832662leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
637.8100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
467.1100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
289.3100.0GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
183.4100.0GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
172.9100.0GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
139.799.9GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
133.199.9GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
94.699.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
82.599.9E-MEXP-1443-raw-cel-1581869863
77.999.9GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.687e-110397At3g07440819932unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.012e-240At2g17510816257EMB2763 (EMBRYO DEFECTIVE 2763)F:ribonuclease activity, RNA binding;P:unknown;C:unknown;BOMFPAVC.G.S.X.
0.022e-240At1g70200843356RNA recognition motif (RRM)-containing proteinF:nucleic acid binding;P:unknown;C:chloroplast;MOFBPVAC.G.S.X.
0.037e-238At5g13090831148unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PFOMC.G.S.X.
0.023e-136At4g30960829221SIP3 (SOS3-INTERACTING PROTEIN 3)Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.C.G.S.X.
0.033e-136At3g50690824233leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.033e-136At1g069233766672-F:unknown;P:unknown;C:unknown;PC.G.S.X.
0.023e-136At1g61740842471unknown proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane;BOPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.452e-40167Glycine maxGmaAffx.16746.1.S1_atBU082241--1e-40At5g48530unknown proteinC.G.S.X.
0.221e-2099Hordeum vulgareContig12485_atContig12485--5e-20At5g48530unknown proteinC.G.S.X.
0.147e-1685Oryza sativaOs02g04785009630.m02636-Zn-finger, CCHC type domain containing protein9e-5At5g22630ADT5 (arogenate dehydratase 5)C.G.S.X.
0.325e-47188Populus trichocarpaPtp.7466.1.S1_atCV271285hypothetical protein-6e-47At5g48530unknown proteinC.G.S.X.
0.229e-1477Triticum aestivumTa.25292.1.S1_atCD373702--2e-13At5g48530unknown proteinC.G.S.X.
0.311e-43174Vitis vinifera1612600_atCF372833hypothetical protein LOC100243464 /// hypothetical protein LOC100255125-6e-43At5g48530unknown proteinC.G.S.X.
0.142e-961Zea maysZm.16102.1.A1_atCF244374--8e-9At5g48530unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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