Gene omics information

Query gene ID At5g48380
Gene name leucine-rich repeat family protein / protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2420.7At5g48380834892leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAS.X.H.G.
0.7385.5At4g38550830012-F:unknown;P:unknown;C:chloroplast;MFPOBVAS.X.H.G.
0.6781.6At1g08930837414ERD6 (EARLY RESPONSE TO DEHYDRATION 6)encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.S.X.H.G.
0.6781.6At3g19010821434oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:flavonol synthase activity, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMS.X.H.G.
0.6176.7At1g59870842281PEN3 (PENETRATION 3)ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.S.X.H.G.
0.4761.2At2g44490819056PEN2 (PENETRATION 2)Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance.S.X.H.G.
0.4457.2At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.199.6GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
23.399.6GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.999.6E-MEXP-546-raw-cel-863289586
19.999.6GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.799.6GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.299.6GSM1330372508GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
18.999.5GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1
18.799.5GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.399.5GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
18.299.5GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-552At1g72180843550leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.012e-552At1g29750839853RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1)Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.C.G.S.X.
0.014e-344At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
0.011e-242At5g02070831776protein kinase-relatedF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.011e-242At3g02130821240RPK2 (RECEPTOR-LIKE PROTEIN KINASE 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:lignin metabolic process, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation, pollen maturation, anther dehiscence;C:plasma membrane;MPOBFVAC.G.S.X.
0.021e-242At1g61860842483protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.011e-242At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.021e-242At1g74490843790protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.195e-25117Glycine maxGma.2606.1.S1_atBE657993--2e-25At5g48380leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.115e-1375Hordeum vulgareContig19089_atContig19089--6e-13At5g48380leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.118e-1273Oryza sativaOs05g0414700AK111590.1-Protein kinase domain containing protein6e-12At5g48380leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.184e-22107Populus trichocarpaPtpAffx.22348.1.S1_atAI165753--1e-22At5g48380leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.102e-552Triticum aestivumTaAffx.73428.1.A1_atCA639792--5e-6At5g48380leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.171e-1893Vitis vinifera1616171_atBM437490hypothetical protein LOC100251471-3e-18At5g48380leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.024e-446Zea maysZm.18990.1.A1_atCO520764BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-1e+0At3g01319unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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