Gene omics information

Query gene ID At5g47980
Gene name transferase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At5g47980834849transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFBS.X.H.G.
1.00100.0At3g45710823713proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PBMOFAS.X.H.G.
0.8693.1At5g47990834850CYP705A5encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings.S.X.H.G.
0.8693.1At5g48000834851CYP708A2Encodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation.S.X.H.G.
0.8693.1At5g48010834852THAS1 (THALIANOL SYNTHASE 1)Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
150.399.9GSM142752MJ001_ATH1_A3-jones-rh1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
148.199.9GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
127.899.9GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with salt
121.699.9GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
108.299.9GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
95.699.9GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with salt
88.599.9E-MEXP-637-raw-cel-913038965
82.299.9E-MEXP-637-raw-cel-913038938
74.399.9GSM231201chl1 at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
69.999.9GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.181e-1171At4g15400827208transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:cellular_component unknown;PFBC.G.S.X.
0.024e-240At3g58410825010meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
0.014e-240At3g30280822728transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.012e-138At5g40470834045-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOFBC.G.S.X.
0.017e-136At3g12980820484HAC5Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC5 acetylation of the H3 or H4 peptides, suggesting that HAC5 can acetylate any of several lysines present in the peptides. Di-acetylation of both lysines 9 and 14 on the H3 peptide significantly reduces the level of incorporated radioactive acetylation catalyzed by HAC5, indicating that HAC5 may acetylate either lysine 9 or lysine 14.C.G.S.X.
0.017e-136At3g49840824146unknown proteinF:unknown;P:unknown;C:endomembrane system;PBMC.G.S.X.
0.027e-136At2g20620816588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.017e-136At2g21590816697APL4Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.11116.1.A1_s_atCD393163MYB transcription factor MYB166-3e+0At5g02160unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareS0000800001B06F1_atS0000800001B06F1--2e-20Atmg00180-C.G.S.X.
0.025e+034Oryza sativaOs07g0641600AK068478.1-SAM (and some other nucleotide) binding motifdomain containing protein2e-7At2g26810unknown proteinC.G.S.X.
0.026e-240Populus trichocarpaPtp.6192.1.S1_s_atDN500438hypothetical protein-3e-2At5g47980transferase family proteinC.G.S.X.
0.027e-136Triticum aestivumTaAffx.108526.1.S1_atCA687381--4e+0At5g54745DegP protease familyC.G.S.X.
0.022e-136Vitis vinifera1621937_atCK138151.1hypothetical protein LOC100245655-2e-1At4g02810unknown proteinC.G.S.X.
0.023e-136Zea maysZm.17612.1.S1_atCK368134--1e-1At5g66675unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00355Link to KaPPA-View 4Acyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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