Gene omics information

Query gene ID At5g47810
Gene name PFK2 (PHOSPHOFRUCTOKINASE 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At5g47810834832PFK2 (PHOSPHOFRUCTOKINASE 2)F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAVS.X.H.G.
0.9597.0At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.9496.7At5g42290834234transcription activator-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.9296.0At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9195.6At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9095.1At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.9095.1At3g58450825014universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFMS.X.H.G.
0.8693.1At3g11050820276ATFER2 (ferritin 2)F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAFS.X.H.G.
0.8693.1At4g21020827849late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVAS.X.H.G.
0.8592.4At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
641.9100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
359.0100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
210.6100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
188.6100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
184.7100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
181.6100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
161.899.9GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
159.599.9GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
157.399.9GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
143.199.9GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-448At4g32840829420PFK6 (PHOSPHOFRUCTOKINASE 6)F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAVC.G.S.X.
0.042e-448At4g29220829043PFK1 (PHOSPHOFRUCTOKINASE 1)F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex, plasma membrane;BOMPFAVC.G.S.X.
0.033e-344At5g61580836279PFK4 (PHOSPHOFRUCTOKINASE 4)F:6-phosphofructokinase activity;P:glycolysis;C:6-phosphofructokinase complex, chloroplast;BOMPFAVC.G.S.X.
0.022e-138At2g40440818638BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.017e-136At2g22490816782CYCD2encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.C.G.S.X.
0.017e-136At1g10410837581-F:unknown;P:N-terminal protein myristoylation;C:chloroplast;POMFC.G.S.X.
0.027e-136At1g73820843718Ssu72-like family proteinF:phosphoprotein phosphatase activity;P:mRNA processing;C:chloroplast;MFPOC.G.S.X.
0.023e+034At5g06410830529DNAJ heat shock N-terminal domain-containing proteinF:protein binding, heat shock protein binding, chaperone binding;P:protein folding;C:unknown;BOMFPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-654Glycine maxGma.15695.1.A1_atBE022791--2e-6At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)C.G.S.X.
0.052e-240Hordeum vulgareContig6490_atContig6490--2e-35At5g56630PFK7 (PHOSPHOFRUCTOKINASE 7)C.G.S.X.
0.205e-28127Oryza sativaOs04g0469500AK071065.1-Phosphofructokinase family protein3e-28At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)C.G.S.X.
0.245e-24113Populus trichocarpaPtp.4470.1.S1_atCV272216hypothetical protein-3e-24At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)C.G.S.X.
0.215e-2099Triticum aestivumTaAffx.8265.1.S1_atBJ296666--3e-20At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)C.G.S.X.
0.124e-27121Vitis vinifera1611851_atBQ799617hypothetical LOC100251605-7e-27At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)C.G.S.X.
0.042e-240Zea maysZm.13029.1.A1_atCA400580--2e+0At4g32840PFK6 (PHOSPHOFRUCTOKINASE 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006096The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00111Link to KaPPA-View 4Glycolysis/gluconeogenesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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