Gene omics information

Query gene ID At5g47330
Gene name palmitoyl protein thioesterase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2319.3At5g47330834780palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:response to salt stress;C:endomembrane system;MPFOS.X.H.G.
0.2930.3At4g23200828419protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:vacuole;MPOBFVAS.X.H.G.
0.2522.6At4g23210828420protein kinase family proteinEncodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid.S.X.H.G.
0.2014.4At4g32800829416AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.S.X.H.G.
0.1710.2At2g43620818964chitinase, putativeF:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVMS.X.H.G.
0.1710.2At5g55050835596GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.146.8At3g47380823892invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
168.5100.0GSM311296Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
151.999.9GSM131109AtGen_B-37_3-2-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
151.599.9GSM131114AtGen_B-42_3-7-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
128.899.9GSM131110AtGen_B-38_3-3-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
113.899.9GSM142854MG001_ATH1_A7-Torres-3N1GSE6176Impact of Type III effectors on plant defense responses
112.099.9GSM131150AtGen_B-36_3-1-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
108.599.9GSM311295Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
106.199.9GSM131137AtGen_B-23_2-2-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
99.299.9GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
78.799.9GSM131142AtGen_B-28_2-7-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.855e-161567At5g47340834781palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFOC.G.S.X.
0.782e-95349At5g47350834782palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFOC.G.S.X.
0.291e-23111At4g17480827459palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFOC.G.S.X.
0.329e-1891At4g17483827461palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFOC.G.S.X.
0.112e-1583At4g17470827458palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFOC.G.S.X.
0.121e-138At3g60340825205palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:vacuole;MPFOC.G.S.X.
0.012e+034At5g38730833864pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAC.G.S.X.
0.012e+034At5g04810830360pentatricopeptide (PPR) repeat-containing proteinF:nucleotide binding, nucleic acid binding;P:unknown;C:chloroplast;PMOFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-1067Glycine maxGma.4059.1.S1_atAI960118--8e-4At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.064e-342Hordeum vulgareContig5918_atContig5918--9e-6At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.074e-344Oryza sativaOs10g0563000AK072479.1-Palmitoyl protein thioesterase family protein1e-2At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.071e-552Populus trichocarpaPtpAffx.145921.1.S1_atCV282466hypothetical protein-3e-15At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.088e-342Triticum aestivumTa.14119.2.S1_a_atCA653400--4e-3At5g47330palmitoyl protein thioesterase family proteinC.G.S.X.
0.074e-857Vitis vinifera1620056_s_atCB008823hypothetical protein LOC100249424-2e-15At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.082e-136Zea maysZm.18316.1.S1_atCO521275hypothetical protein LOC100216902-6e-1At5g47330palmitoyl protein thioesterase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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