Gene omics information

Query gene ID At5g47220
Gene name ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9195.6At5g47220834768ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.S.X.H.G.
0.8391.4At5g61900836311BON1 (BONZAI 1)Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.S.X.H.G.
0.7385.5At5g66640836796DAR3 (DA1-RELATED PROTEIN 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFS.X.H.G.
0.6378.1At3g50930824257BCS1 (CYTOCHROME BC1 SYNTHESIS)F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:mitochondrion, plastid;BOMFPAVS.X.H.G.
0.4457.2At2g41640818762transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;PMOBFS.X.H.G.
0.4253.9At1g35210840410unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
348.2100.0E-MEXP-807-raw-cel-1173273223
347.5100.0E-MEXP-807-raw-cel-1173273196
273.8100.0E-MEXP-807-raw-cel-1173273088
263.8100.0E-MEXP-807-raw-cel-1173273060
261.0100.0E-MEXP-807-raw-cel-1173273116
238.2100.0E-MEXP-807-raw-cel-1173273170
187.5100.0E-MEXP-807-raw-cel-1173273252
135.399.9E-MEXP-807-raw-cel-1173273144
102.499.9E-MEXP-807-raw-cel-1173272948
97.599.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.323e-69262At4g17500827464ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.127e-1891At2g44840819093ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.071e-1687At5g47230834770ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.061e-1377At4g17490827463ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.056e-961At3g61630825336CRF6 (CYTOKININ RESPONSE FACTOR 6)CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.C.G.S.X.
0.116e-961At2g31230817680ATERF15 (Ethylene-responsive element binding factor 15)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.131e-757At3g23240821902ERF1 (ETHYLENE RESPONSE FACTOR 1)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.C.G.S.X.
0.124e-756At5g50080835072DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.C.G.S.X.
0.124e-756At5g61590836280AP2 domain-containing transcription factor family proteinencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-963Glycine maxGma.68.1.S1_atAF357211.1ethylene-responsive element binding protein 1-7e-9At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)C.G.S.X.
0.067e-754Hordeum vulgareContig10472_atContig10472--9e-3At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.053e-344Oryza sativaOs02g0654700AK073812.1-Ethylene-responsive element binding protein3e-3At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.185e-756Populus trichocarpaPtpAffx.203341.1.S1_s_atpmrna6649AP2/ERF domain-containing transcription factor-3e-7At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.034e-136Triticum aestivumTaAffx.11817.1.A1_atBJ322579--2e-2At1g51915cryptdin protein-relatedC.G.S.X.
0.087e-340Vitis vinifera1621080_atCF568964--1e-18At1g28360ERF12 (ERF DOMAIN PROTEIN 12)C.G.S.X.
0.071e-550Zea maysZm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
XGO:0009864The series of molecular signals mediated by jasmonic acid involved in induced systemic resistance.
XGO:0045941Any process that activates or increases the frequency, rate or extent of transcription.
XGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
SGO:0009873A series of molecular signals mediated by ethylene (ethene).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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