Gene omics information

Query gene ID At5g45320
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g45320834568-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
1.00100.0At1g61760842473harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
1.00100.0At5g38070833787zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVS.X.H.G.
0.9998.1At1g05760837084RTM1 (restricted tev movement 1)Specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistanceS.X.H.G.
0.9998.1At1g05770837085jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9998.1At1g73370843672SUS6 (SUCROSE SYNTHASE 6)Encodes a protein with sucrose synthase activity (SUS6).S.X.H.G.
0.9998.1At2g14620815950xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBOS.X.H.G.
0.9998.1At2g27140817256heat shock family proteinF:molecular_function unknown;P:response to heat;C:membrane;PBOMS.X.H.G.
0.9998.1At3g03200821226anac045 (Arabidopsis NAC domain containing protein 45)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POVMBS.X.H.G.
0.9998.1At3g13590820561DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1244.2100.0GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
1225.7100.0GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
1091.2100.0GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
188.5100.0GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
102.399.9GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
68.699.9GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
65.199.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
55.899.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
55.399.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
51.699.8GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-136At2g39670818550radical SAM domain-containing proteinF:iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity;P:rRNA processing;C:cytoplasm;BOPAVC.G.S.X.
0.021e+034At5g66620836794DAR6 (DA1-RELATED PROTEIN 6)F:zinc ion binding;P:unknown;C:unknown;MOBFPVAC.G.S.X.
0.001e+034At1g48090841226phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:chloroplast;MOFPBAC.G.S.X.
0.015e+032At5g4642083468516S rRNA processing protein RimM familyF:ribosome binding, nucleotidyltransferase activity;P:metabolic process, rRNA processing, ribosome biogenesis;C:chloroplast;BOMFPC.G.S.X.
0.015e+032At5g46400834683PRP39-2F:unknown;P:RNA processing;C:intracellular;OMFPBVAC.G.S.X.
0.025e+032At4g18840827618pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e+032Glycine maxPsAffx.psMA016xF06f_s_atPsAffx.psMA016xF06f--6e-1At1g79790haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.032e+032Hordeum vulgareContig16379_s_atContig16379--3e-1At2g44080ARL (ARGOS-LIKE)C.G.S.X.
0.042e+034Oryza sativaOsAffx.27834.1.S1_at---0C.G.S.X.
0.041e-138Populus trichocarpaPtpAffx.208581.1.S1_atpmrna17027hypothetical protein-2e-6At3g02690integral membrane family proteinC.G.S.X.
0.045e+032Triticum aestivumTaAffx.81592.4.S1_s_atCA684860--2e+0At1g64355unknown proteinC.G.S.X.
0.045e+030Vitis vinifera1620380_x_atCF203025.1--1e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.038e+030Zea maysZmAffx.406.3.A1_atAI676830--8e-1At1g76590zinc-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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