Gene omics information

Query gene ID At5g45310
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g45310834567unknown proteinF:unknown;P:unknown;C:endomembrane system;OMVBFPAS.X.H.G.
0.9195.6At5g43770834399proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MBPOFVAS.X.H.G.
0.8994.6At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
0.8793.5At5g66110836743metal ion bindingF:metal ion binding;P:metal ion transport;C:plasma membrane;PFMS.X.H.G.
0.8491.9At3g22500821821ATECP31late embryogenesis abundant (LEA) proteinS.X.H.G.
0.8391.4At3g61040825276CYP76C7encodes a protein with cytochrome P450 domainS.X.H.G.
0.8190.4At2g42000818800plant EC metallothionein-like family 15 proteinF:zinc ion binding;P:biological_process unknown;C:unknown;PMOBFS.X.H.G.
0.8089.8At1g75490843885DNA binding / transcription factorencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
0.8089.8At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7989.1At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
806.2100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
550.9100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
399.6100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
227.5100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
223.4100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
220.5100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
216.7100.0GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seeds
215.0100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
206.3100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
199.9100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-240At1g61290842423SYP124 (SYNTAXIN OF PLANTS 124)member of SYP12 Gene FamilyC.G.S.X.
0.021e-138At2g35480818113unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PC.G.S.X.
0.025e-136At5g41060834108zinc finger (DHHC type) family proteinF:zinc ion binding;P:unknown;C:plasma membrane;MOFPC.G.S.X.
0.035e-136At3g10116820174unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.025e-136At2g21930816729F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.025e-136At1g78730844209F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFC.G.S.X.
0.012e+034At5g41790834184CIP1 (COP1-INTERACTIVE PROTEIN 1)encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-136Glycine maxGmaAffx.26466.1.S1_atBE610036--3e+0At3g10260reticulon family proteinC.G.S.X.
0.034e-342Hordeum vulgareContig22706_atContig22706--1e+0At1g59833-C.G.S.X.
0.034e+034Oryza sativaOsAffx.19987.1.S1_at---0C.G.S.X.
0.083e-1273Populus trichocarpaPtpAffx.223317.1.S1_atpmrna41252hypothetical protein-2e-12At5g45310unknown proteinC.G.S.X.
0.029e+032Triticum aestivumTaAffx.11755.1.S1_atBJ283635--3e-1At2g44340VQ motif-containing proteinC.G.S.X.
0.026e-134Vitis vinifera1618793_atCB340058--3e+0At3g49860ATARLA1B (ADP-ribosylation factor-like A1B)C.G.S.X.
0.034e+032Zea maysZm.7088.1.S1_atAY106783.1charged multivesicular body protein 4b-9e-31At2g19830SNF7.2C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage