Gene omics information

Query gene ID At5g44850
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8592.4At5g44850834515-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOS.X.H.G.
0.7788.0At2g27520817298F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.7788.0At3g58860825055F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7788.0At2g35460818111harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
0.7687.4At4g17130---S.X.H.G.
0.7586.9At5g52975835376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7385.5At4g17580827475Bax inhibitor-1 family protein / BI-1 family proteinF:molecular_function unknown;P:negative regulation of apoptosis, regulation of apoptosis, apoptosis;C:integral to membrane;BMOFPVS.X.H.G.
0.7385.5At2g24255816960-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7385.5At5g15380831390DRM1 (domains rearranged methylase 1)Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.S.X.H.G.
0.7385.5At4g31710829299ATGLR2.4member of Putative ligand-gated ion channel subunit familyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
419.0100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
346.9100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
305.9100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
135.999.9GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
86.199.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
86.099.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
83.499.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
72.599.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
65.399.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
63.199.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.084e-1169At5g52460835322EDA41 (embryo sac development arrest 41)F:unknown;P:polar nucleus fusion;C:cellular_component unknown;PC.G.S.X.
0.089e-961At3g53550824523-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.289e-961At1g05080839328F-box family proteinF:molecular_function unknown;P:unknown;C:unknown;PBC.G.S.X.
0.083e-859At3g10750820244-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.052e-654At1g22000838803F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBAVC.G.S.X.
0.018e-342At5g56560835757F-box family proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.031e-138At3g49480824110-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.025e-136At4g01990828172pentatricopeptide (PPR) repeat-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;POFMBC.G.S.X.
0.025e-136At4g23790828479unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxGmaAffx.55989.1.S1_atBQ742008--2e-5At1g07570APK1AC.G.S.X.
0.031e+130Hordeum vulgareHB29O17r_x_atHB29O17r--6e+0At5g44850-C.G.S.X.
0.024e+034Oryza sativaOs11g0685600CB659419-WRKY transcription factor 412e+0At3g53630unknown proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.215899.1.S1_s_atpmrna30360--2e-1At5g44850-C.G.S.X.
0.035e-136Triticum aestivumTa.15504.1.S1_atCA485152--3e+0At1g01725unknown proteinC.G.S.X.
0.026e-134Vitis vinifera1611791_atCB002442--3e-1At3g52360unknown proteinC.G.S.X.
0.028e-134Zea maysZm.5077.1.A1_atAY106102.1hypothetical protein LOC100217191-5e-2At3g28070nodulin MtN21 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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