Gene omics information

Query gene ID At5g44060
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g44060834429unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2217.5At2g21120816647unknown proteinF:unknown;P:biological_process unknown;C:unknown;MFPBOS.X.H.G.
0.2217.5At3g08710820018ATH9 (thioredoxin H-type 9)F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cytosol, nucleus, plasma membrane;BOMPFAVS.X.H.G.
0.2014.4At3g55960824762NLI interacting factor (NIF) family proteinF:phosphatase activity;P:biological_process unknown;C:unknown;MOFPS.X.H.G.
0.135.8At5g01710831693-F:unknown;P:unknown;C:endomembrane system;POMBS.X.H.G.
0.103.4At1g28280839722VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMFOBS.X.H.G.
0.030.6At1g04000839339unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.020.4At3g57070824874glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:chloroplast;OPMBFS.X.H.G.
0.010.2At4g15470827218-F:unknown;P:unknown;C:unknown;BOMPFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
58.299.8GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
54.599.8GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
54.099.8GSM284398Arabidopsis GGSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
44.299.8GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
41.999.8GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
41.399.8GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
41.099.8GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
39.599.8GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutants
39.499.8GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
36.699.7GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.296e-548At1g04000839339unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e-136At3g54620824627BZIP25 (BASIC LEUCINE ZIPPER 25)bZIP transcription factor-like protein mRNAC.G.S.X.
0.019e-134At4g18570827588proline-rich family proteinF:unknown;P:unknown;C:unknown;MPOFBVAC.G.S.X.
0.019e-134At4g00800828005binding / protein binding / zinc ion bindingF:protein binding, binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;OMBFPAVC.G.S.X.
0.019e-134At4g23370828436unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBC.G.S.X.
0.039e-134At4g22830828382unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.065e-342Glycine maxGmaAffx.52371.2.S1_atBM528145--4e-6At1g04000unknown proteinC.G.S.X.
0.034e-134Hordeum vulgareHVSMEn0016D01r2_atHVSMEn0016D01r2--3e-1At2g30560glycine-rich proteinC.G.S.X.
0.054e-136Oryza sativaOsAffx.8662.1.S1_at---0C.G.S.X.
0.048e-548Populus trichocarpaPtpAffx.38668.1.A1_atCV240828hypothetical protein-9e-9At1g04000unknown proteinC.G.S.X.
0.049e-134Triticum aestivumTa.18883.1.S1_atCA643456--7e-1At2g14810unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1609442_atCF373210hypothetical protein LOC100243127-3e-4At3g05800transcription factorC.G.S.X.
0.046e+030Zea maysZmAffx.999.1.S1_atAI881222hypothetical protein LOC100279401-5e-2At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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