CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g43745

Gene name phosphotransferase-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.92 96.0 At5g43745 834395 phosphotransferase-related F:unknown;P:unknown;C:chloroplast, chloroplast envelope;POB S.X. H.G.
0.44 57.2 At2g35155 818082 catalytic F:catalytic activity;P:biological_process unknown;C:cellular_component unknown;PB S.X. H.G.
0.43 55.3 At5g24000 832465 unknown protein F:unknown;P:unknown;C:chloroplast;BOPA S.X. H.G.
0.43 55.3 At5g12150 831088 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein Encodes a protein with similarity to REN1, a Rho GTPase activating protein. S.X. H.G.
0.43 55.3 At4g14510 827098 RNA binding F:RNA binding;P:biological_process unknown;C:chloroplast;POMFBVA S.X. H.G.
0.43 55.3 At1g78180 844154 binding F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO S.X. H.G.
0.41 52.4 At1g49010 841324 myb family transcription factor F:transcription factor activity, DNA binding;P:in 6 processes;C:unknown;PMOFBV S.X. H.G.
0.40 50.8 At1g06240 837134 unknown protein F:unknown;P:biological_process unknown;C:unknown;BOPFM S.X. H.G.
0.39 48.4 At1g17850 838364 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OBPMF S.X. H.G.
0.38 46.7 At4g05090 825853 inositol monophosphatase family protein F:3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity;P:sulfur metabolic process;C:chloroplast;BOFPMA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.9 99.8 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
43.5 99.8 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.8 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.0 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
36.1 99.7 GSM133773 Lindsey_1-25_torpedo-meristem_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
34.6 99.7 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
33.8 99.7 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.7 99.7 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
32.6 99.7 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
30.2 99.7 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.85 0 1402 At5g02940 831426 - F:unknown;P:unknown;C:chloroplast, chloroplast envelope;POB C.G. S.X.
0.01 3e-1 38 At5g02100 831841 UNE18 (UNFERTILIZED EMBRYO SAC 18) Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. C.G. S.X.
0.01 3e-1 38 At3g01470 821138 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development. C.G. S.X.
0.01 3e-1 38 At2g38255 818405 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFB C.G. S.X.
0.01 1e+0 36 At3g11150 820285 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P C.G. S.X.
0.01 1e+0 36 At3g05970 819767 LACS6 (long-chain acyl-CoA synthetase 6) encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes C.G. S.X.
0.01 5e+0 34 At5g65020 836626 ANNAT2 (Annexin Arabidopsis 2) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides. C.G. S.X.
0.01 5e+0 34 At5g42810 834292 ATIPK1 (Inositol-pentakisphosphate 2-kinase 1) Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 5e-10 67 Glycine max GmaAffx.57300.1.S1_at AW200894 - - 8e-11 At5g43745 phosphotransferase-related C.G. S.X.
0.01 2e+0 34 Hordeum vulgare Contig658_at Contig658 - - 3e-19 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
0.09 1e-5 54 Oryza sativa Os03g0163200 AK108613.1 - Plant protein of unknown function family protein 2e-2 At3g43630 nodulin, putative C.G. S.X.
0.20 2e-15 85 Populus trichocarpa PtpAffx.115782.1.S1_at CK319152 hypothetical protein - 3e-21 At5g02940 - C.G. S.X.
0.07 2e-8 61 Triticum aestivum Ta.939.1.A1_at BG909212 - - 9e-9 At5g43745 phosphotransferase-related C.G. S.X.
0.01 9e-2 38 Vitis vinifera 1620604_at CF568828 - - 3e+0 At4g38401 unknown protein C.G. S.X.
0.01 1e-1 38 Zea mays Zm.3347.1.A1_at CK986004 Cystatin-like - 5e-1 At5g12140 ATCYS1 (A. thaliana cystatin-1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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