Gene omics information

Query gene ID At5g43450
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseS.X.H.G.
1.00100.0At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.S.X.H.G.
0.8994.6At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFS.X.H.G.
0.8693.1At4g37370829891CYP81D8member of CYP81DS.X.H.G.
0.8089.8At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
140.199.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
121.199.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
113.499.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
104.799.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
81.699.9GSM131395AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)
81.299.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
74.499.9GSM134404St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1
70.899.9E-MEXP-807-raw-cel-1173272948
67.699.9GSM134396St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1
66.499.8GSM134413St.Clair_1-110_375_Van-0_0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.820821At5g434408343642-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseC.G.S.X.
0.352e-68260At5g595308360722-oxoglutarate-dependent dioxygenase, putativeF:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFMC.G.S.X.
0.343e-52206At5g59540836073oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.422e-40167At1g043808395352-oxoglutarate-dependent dioxygenase, putativeencodes a protein similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.222e-37157At1g066208371712-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.422e-31137At1g043508395422-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.192e-1377At1g034008387512-oxoglutarate-dependent dioxygenase, putativeA single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-138Glycine maxGmaAffx.55339.1.S1_atBM178203--5e-2At5g434502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.021e+034Hordeum vulgareContig526_x_atContig526--2e+0At1g06530myosin heavy chain-relatedC.G.S.X.
0.021e+036Oryza sativaOsAffx.15601.1.S1_at---0C.G.S.X.
0.073e-1273Populus trichocarpaPtp.4827.1.S1_a_atDN490862hypothetical protein-3e-12At5g434502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.056e-136Triticum aestivumTa.12050.1.A1_atBQ171485--1e-3At1g043502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.071e-859Vitis vinifera1615043_atCF207020.1--2e-8At5g434502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.024e+032Zea maysZm.15673.1.A1_atCO521248hypothetical protein LOC100191542-7e+0At2g32650-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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