Gene omics information

Query gene ID At5g43440
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At5g434408343642-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseS.X.H.G.
0.2624.4At4g09760826564choline kinase, putativeencodes a choline synthase whose gene expression is induced by high salt and mannitol.S.X.H.G.
0.2522.6At1g65790842890ARK1 (A. THALIANA RECEPTOR KINASE 1)An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain.S.X.H.G.
0.1710.2At3g26170822218CYP71B19putative cytochrome P450S.X.H.G.
0.082.3At5g11610831033exostosin family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBFS.X.H.G.
0.061.4At2g29670817517bindingF:binding;P:unknown;C:chloroplast;PBOAMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.799.8GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
46.899.8GSM133736Buchanan-Wollaston_A-8-bwoll-Ei2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
43.699.8GSM133734Buchanan-Wollaston_A-6-bwoll-NG2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
40.599.8GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
36.799.7GSM133733Buchanan-Wollaston_A-5-bwoll-NG1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
29.299.7E-MEXP-1454-raw-cel-1585858071
28.999.7GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
26.899.7E-ATMX-32-raw-cel-1562974409
26.299.7GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
24.799.6E-ATMX-32-raw-cel-1562974595
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.820821At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseC.G.S.X.
0.438e-74278At5g595308360722-oxoglutarate-dependent dioxygenase, putativeF:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFMC.G.S.X.
0.481e-63244At1g043808395352-oxoglutarate-dependent dioxygenase, putativeencodes a protein similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.502e-53210At5g59540836073oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.395e-29129At1g043508395422-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.224e-1789At1g066208371712-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.111e-1171At2g308408176352-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-654Glycine maxGmaAffx.67389.1.S1_atBG363518--6e-10At1g066202-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.031e+034Hordeum vulgareContig23055_atContig23055--5e-18At1g51740SYP81 (SYNTAXIN OF PLANTS 81)C.G.S.X.
0.024e+034Oryza sativaOs.7736.1.S1_at---0C.G.S.X.
0.043e-344Populus trichocarpaPtp.4827.1.S1_a_atDN490862hypothetical protein-3e-12At5g434502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.041e-138Triticum aestivumTaAffx.31520.1.S1_atCA614210--5e-5At1g043502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.056e-134Vitis vinifera1615043_atCF207020.1--2e-8At5g434502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.024e+032Zea maysZm.12351.1.A1_atBQ779084HEC/Ndc80p family protein-2e+0At5g08391unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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