Gene omics information

Query gene ID At5g43230
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At5g43230834341unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBS.X.H.G.
0.7788.0At3g20460821591sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOAS.X.H.G.
0.5065.3At4g20450827793leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.4050.8At5g07450830636CYCP4F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;FOMPBS.X.H.G.
0.3745.0At3g48940824055remorin family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;OPBMFAS.X.H.G.
0.3643.6At5g36270833624-pseudogene of dehydroascorbate reductaseS.X.H.G.
0.3541.6At3g01730821089unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
236.1100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
171.2100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
170.2100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
149.299.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
139.699.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
137.299.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
123.899.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
117.299.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
113.899.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
113.599.9GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-242At5g06930830584-F:unknown;P:unknown;C:chloroplast;OMBFPVAC.G.S.X.
0.042e-242At3g57780824947-F:unknown;P:unknown;C:unknown;OMFBPVAC.G.S.X.
0.018e-240At4g20140827760GSO1 (GASSHO1)Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.C.G.S.X.
0.023e-138At3g01810821073-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPAC.G.S.X.
0.013e-138At1g19880838576regulator of chromosome condensation (RCC1) family proteinF:Ran GTPase binding;P:biological_process unknown;C:cellular_component unknown;MOBPFAVC.G.S.X.
0.013e-138At1g68190843148zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-552Glycine maxGmaAffx.71462.1.S1_atBM308753--5e-6At5g43230unknown proteinC.G.S.X.
0.022e+034Hordeum vulgareContig12796_atContig12796--5e-1At5g39110germin-like protein, putativeC.G.S.X.
0.012e-450Oryza sativaOs09g0487200AK070460.1-Conserved hypothetical protein3e-8At2g42320nucleolar protein gar2-relatedC.G.S.X.
0.174e-20101Populus trichocarpaPtpAffx.208241.1.S1_s_atpmrna16404hypothetical protein-1e-20At5g43230unknown proteinC.G.S.X.
0.015e+034Triticum aestivumTaAffx.109255.1.S1_atCA677969--1e+1At5g64810WRKY51C.G.S.X.
0.056e-342Vitis vinifera1606524_atCB979170hypothetical protein LOC100266440-2e-19At3g01810-C.G.S.X.
0.022e+034Zea maysZm.3632.1.S1_atCF627896KED-like protein /// cylicin-1-2e-1At3g05060SAR DNA-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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