Gene omics information

Query gene ID At5g43170
Gene name AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g43170834334AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.S.X.H.G.
0.4050.8At3g05320819696unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.2014.4At5g46780834721VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBVS.X.H.G.
0.1710.2At2g44500819057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.1710.2At5g64660836587U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;POMBFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
173.9100.0E-MEXP-807-raw-cel-1173273196
121.699.9E-MEXP-807-raw-cel-1173273088
94.999.9E-MEXP-98-raw-cel-320188804
92.399.9E-MEXP-98-raw-cel-320189024
56.799.8E-MEXP-98-raw-cel-320188859
54.099.8E-MEXP-807-raw-cel-1173272948
49.699.8GSM142630MC002_ATH1_A3.2-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
49.699.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
48.999.8E-MEXP-807-raw-cel-1173273116
48.299.8E-MEXP-807-raw-cel-1173273170
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.302e-1789At5g04340830313ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6)putative c2h2 zinc finger transcription factor mRNA,C.G.S.X.
0.395e-1271At1g27730839666STZ (salt tolerance zinc finger)Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.C.G.S.X.
0.037e-238At5g67450836881AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor.C.G.S.X.
0.011e+034At5g24360832507IRE1-1 (INOSITOL REQUIRING 1-1)F:endoribonuclease activity, producing 5'-phosphomonoesters, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, mRNA processing;C:endomembrane system;MPOBFVAC.G.S.X.
0.021e+034At5g42560834262abscisic acid-responsive HVA22 family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBVC.G.S.X.
0.031e+034At5g14010831249zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular, chloroplast;PC.G.S.X.
0.021e+034At4g02310828070kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e+034Glycine maxGmaAffx.92932.1.S1_atCF808678--3e-5At5g67450AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)C.G.S.X.
0.064e-857Hordeum vulgareContig21793_atContig21793--1e-7At5g43170AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)C.G.S.X.
0.062e-344Oryza sativaOs12g0583700AY219847.1-Zn-finger, C2H2 type domain containing protein6e-4At5g04340ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6)C.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.213649.1.S1_atpmrna26658hypothetical protein-1e-2At2g42660myb family transcription factorC.G.S.X.
0.045e+032Triticum aestivumTaAffx.111191.1.S1_atCA646179--4e+0At5g43170AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)C.G.S.X.
0.096e-650Vitis vinifera1609107_atCF608697hypothetical protein LOC100258264-1e-13At1g27730STZ (salt tolerance zinc finger)C.G.S.X.
0.035e-134Zea maysZm.9923.1.A1_atBM349111--1e+0At2g46130WRKY43C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
XGO:0042538A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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