Gene omics information

Query gene ID At5g43110
Gene name APUM14 (Arabidopsis Pumilio 14)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5469.5At5g43110834328APUM14 (Arabidopsis Pumilio 14)F:RNA binding, binding;P:unknown;C:cellular_component unknown;FOMPS.X.H.G.
0.5368.6At3g11380820310pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMBFS.X.H.G.
0.4659.8At1g02490839518unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownS.X.H.G.
0.4457.2At1g74110843751CYP78A10member of CYP78AS.X.H.G.
0.3643.6At5g13130831152ATP bindingF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MOPVBFAS.X.H.G.
0.3338.1At4g03170828050DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;OPMFS.X.H.G.
0.3032.1At2g42180818818unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2930.3At3g52690824435-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.2830.3At1g33830840278avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinF:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
738.3100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
458.9100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
312.2100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
267.1100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
226.9100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
222.3100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
222.1100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
209.9100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
204.3100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
192.0100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.662e-180632At5g43090834325APUM13 (Arabidopsis Pumilio 13)F:RNA binding, binding;P:unknown;C:cellular_component unknown;MFOPC.G.S.X.
0.022e-138At5g25030832573ATP binding / nucleotide binding / phenylalanine-tRNA ligaseF:phenylalanine-tRNA ligase activity, nucleotide binding, ATP binding;P:phenylalanyl-tRNA aminoacylation, translation;C:cytoplasm;PMFOBC.G.S.X.
0.012e-138At4g31670829295UBP18 (UBIQUITIN-SPECIFIC PROTEASE 18)F:cysteine-type endopeptidase activity, ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:endomembrane system;MOFPBVAC.G.S.X.
0.018e-136At3g27970822421exonuclease/ nucleic acid binding / zinc ion bindingF:zinc ion binding, exonuclease activity, nucleic acid binding;P:biological_process unknown;C:intracellular;MFPOC.G.S.X.
0.018e-136At3g10360820198APUM4 (Arabidopsis Pumilio 4)F:RNA binding, binding;P:biological_process unknown;C:cellular_component unknown;FOMPBC.G.S.X.
0.018e-136At3g17620821029F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.018e-136At3g17540821020F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.018e-136At3g17530821019F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.018e-136At1g02650837951DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding, binding;P:protein folding;C:cellular_component unknown;PMFOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGma.14195.1.A1_atCD417291--7e-1At4g17240unknown proteinC.G.S.X.
0.032e+034Hordeum vulgareContig7304_s_atContig7304--2e+0At5g43110APUM14 (Arabidopsis Pumilio 14)C.G.S.X.
0.023e-242Oryza sativaOsAffx.3021.1.S1_at---0C.G.S.X.
0.027e-240Populus trichocarpaPtpAffx.23061.1.A1_s_atCV260979hypothetical protein-6e-6At4g17070peptidyl-prolyl cis-trans isomeraseC.G.S.X.
0.023e+034Triticum aestivumTaAffx.25296.1.S1_atCA703025--3e-4At1g09200histone H3C.G.S.X.
0.024e+032Vitis vinifera1619460_atCB339411--1e+0At3g55330PPL1 (PsbP-like protein 1)C.G.S.X.
0.021e+034Zea maysZm.8756.1.A1_atBM333012--4e+0At1g17860trypsin and protease inhibitor family protein / Kunitz family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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