Gene omics information

Query gene ID At5g43060
Gene name cysteine proteinase, putative / thiol protease, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At5g43060834321cysteine proteinase, putative / thiol protease, putativeF:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:response to salt stress;C:vacuole;MOPVBAFS.X.H.G.
0.4457.2At5g44790834509RAN1 (RESPONSIVE-TO-ANTAGONIST 1)ATP dependent copper transporter vital for ethylene response pathwayS.X.H.G.
0.3643.6At2g17440816250leucine-rich repeat family proteinF:protein binding;P:unknown;C:plasma membrane;MPBOFVAS.X.H.G.
0.2522.6At4g15093827174catalytic LigB subunit of aromatic ring-opening dioxygenase familyF:electron carrier activity, oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;P:oxidation reduction, cellular aromatic compound metabolic process;C:cellular_component unknown;BFOPAMS.X.H.G.
0.135.8At5g41990834204WNK8 (WITH NO LYSINE (K) KINASE 8)Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.299.6GSM134301Penfield_1-3_endosperm-control_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
16.799.5GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
16.599.5GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
15.499.5GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
15.299.4GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
14.499.4GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
14.399.4GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
14.199.4GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
14.199.4GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
13.899.4GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.642e-140500At1g47128841122RD21 (responsive to dehydration 21)cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21)C.G.S.X.
0.189e-22105At3g19390821473cysteine proteinase, putative / thiol protease, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAFC.G.S.X.
0.168e-1685At4g11320826734cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFC.G.S.X.
0.148e-1375At4g36880829841CP1 (CYSTEINE PROTEINASE1)F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis, response to gibberellin stimulus, response to red light;C:endomembrane system;MOPVBAFC.G.S.X.
0.133e-1273At3g19400821474cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFC.G.S.X.
0.141e-1171At4g11310826733cysteine proteinase, putativecysteine proteinase precursor-like proteinC.G.S.X.
0.102e-1067At4g23520828452cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFC.G.S.X.
0.072e-448At1g09850837517XBCP3 (xylem bark cysteine peptidase 3)Arabidopsis thaliana papain-like cysteine peptidaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.141e-36155Glycine maxGma.10988.3.S1_s_atCA938233--1e-36At5g43060cysteine proteinase, putative / thiol protease, putativeC.G.S.X.
0.141e-654Hordeum vulgareAF134152_atAF134152--9e-7At5g43060cysteine proteinase, putative / thiol protease, putativeC.G.S.X.
0.142e-861Oryza sativaOs04g0650000AK121500.1-Oryzain alpha chain precursor (EC 3.4.22.-)2e-26At1g47128RD21 (responsive to dehydration 21)C.G.S.X.
0.232e-35151Populus trichocarpaPtp.1407.1.S1_atBP934810hypothetical protein-2e-35At5g43060cysteine proteinase, putative / thiol protease, putativeC.G.S.X.
0.105e-550Triticum aestivumTa.22672.1.S1_atCD878649triticain alpha-1e-12At1g47128RD21 (responsive to dehydration 21)C.G.S.X.
0.261e-27123Vitis vinifera1613772_s_atBQ792569hypothetical protein LOC100241957-6e-27At5g43060cysteine proteinase, putative / thiol protease, putativeC.G.S.X.
0.172e-1479Zea maysZm.5987.1.A2_atAF019147.1cysteine protease component of protease-inhibitor complex-7e-14At5g43060cysteine proteinase, putative / thiol protease, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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