Gene omics information

Query gene ID At5g43020
Gene name leucine-rich repeat transmembrane protein kinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.157.8At5g43020834317leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.5065.3At4g15830827264bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.4050.8At3g53190824485pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFOS.X.H.G.
0.4050.8At4g33260829462CDC20.2putative cdc20 protein (CDC20.2)S.X.H.G.
0.3541.6At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.399.7GSM131654ATGE_8_CGSE5633AtGenExpress: Developmental series (shoots and stems)
25.899.7GSM131663ATGE_29_C2GSE5633AtGenExpress: Developmental series (shoots and stems)
25.799.7GSM131661ATGE_29_A2GSE5633AtGenExpress: Developmental series (shoots and stems)
25.099.6GSM131679ATGE_51_AGSE5633AtGenExpress: Developmental series (shoots and stems)
24.999.6GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)
24.899.6GSM131664ATGE_46_AGSE5633AtGenExpress: Developmental series (shoots and stems)
24.399.6E-TABM-19-raw-cel-489757236
24.399.6GSM133944Weigel_2-36_CHIP-214_D_Rep3_ATH1GSE5746FRI FLC combos
24.199.6E-TABM-19-raw-cel-489757488
24.199.6GSM133930Weigel_2-22_CHIP-210-A_Rep1_ATH1GSE5746FRI FLC combos
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.053e-1067At3g50230824185leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.094e-963At5g67200836855leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.014e-344At3g24660822062TMKL1 (transmembrane kinase-like 1)member of Receptor kinase-like protein familyC.G.S.X.
0.014e-344At2g36570818230leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.022e-242At1g60630842357leucine-rich repeat family proteinF:protein kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.032e-242At1g108503766694ATP binding / protein binding / protein kinase/ protein serine/threonine kinaseF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.016e-240At2g39110818497protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.023e-138At1g33330840227peptide chain release factor, putativeF:translation release factor activity;P:translational termination;C:chloroplast;BOMFPVC.G.S.X.
0.013e-138At1g69990843336leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-138Glycine maxGma.406.5.S1_atBM885775--1e-73At1g02500SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)C.G.S.X.
0.022e+034Hordeum vulgareContig6929_atContig6929--3e-19At3g46920protein kinase family proteinC.G.S.X.
0.015e-138Oryza sativaOs10g0377000NM_196161.1-Conserved hypothetical protein7e-2At5g19090heavy-metal-associated domain-containing proteinC.G.S.X.
0.172e-21105Populus trichocarpaPtpAffx.45840.1.A1_s_atCK091852hypothetical protein-5e-22At5g43020leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.027e-240Triticum aestivumTa.4101.1.A1_atBJ264378--6e+0At3g15530methyltransferaseC.G.S.X.
0.011e+034Vitis vinifera1622043_atCF211984--1e+0At1g10100unknown proteinC.G.S.X.
0.012e+034Zea maysZm.350.1.S1_atU62753.1acidic ribosomal protein P2b-4e-1At2g2771060S acidic ribosomal protein P2 (RPP2B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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